Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 AL360270.3-201ENST00000609118 1348 ntBASIC13.48□□□□□ -0.25
MBD3L3A6NE82 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 AL591846.1-201ENST00000451736 433 ntBASIC13.48□□□□□ -0.25
MBD3L3A6NE82 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 COX5BP1-201ENST00000507622 393 ntBASIC13.48□□□□□ -0.25
MBD3L3A6NE82 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 AP006547.1-201ENST00000563435 692 ntBASIC13.48□□□□□ -0.25
MBD3L3A6NE82 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 AC243960.2-201ENST00000600996 747 ntBASIC13.48□□□□□ -0.25
MBD3L3A6NE82 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 GPR182-203ENST00000622922 591 ntBASIC13.48□□□□□ -0.25
MBD3L3A6NE82 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.48□□□□□ -0.25
MBD3L3A6NE82 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 MIR1247-201ENST00000408206 136 ntBASIC13.47□□□□□ -0.25
MBD3L3A6NE82 AC079178.1-201ENST00000420915 656 ntBASIC13.47□□□□□ -0.25
MBD3L3A6NE82 AC007969.1-201ENST00000433675 447 ntBASIC13.47□□□□□ -0.25
MBD3L3A6NE82 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 RPSAP36-202ENST00000494591 1261 ntBASIC13.47□□□□□ -0.25
MBD3L3A6NE82 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 RN7SL713P-201ENST00000582127 302 ntBASIC13.47□□□□□ -0.25
MBD3L3A6NE82 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 AC244093.1-201ENST00000610837 814 ntBASIC13.47□□□□□ -0.25
MBD3L3A6NE82 AL133338.1-201ENST00000565695 1517 ntBASIC13.47□□□□□ -0.25
MBD3L3A6NE82 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L3A6NE82 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L3A6NE82 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L3A6NE82 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.46□□□□□ -0.25
MBD3L3A6NE82 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L3A6NE82 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L3A6NE82 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms