Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 AC148477.4-201ENST00000613430 1793 ntBASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.67■□□□□ 0.1
TBC1D3BA6NDS4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 CD8B2-202ENST00000417670 633 ntBASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 Z93015.1-201ENST00000451718 390 ntBASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 AC099548.2-209ENST00000480264 625 ntBASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 MIR4741-201ENST00000579822 90 ntBASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 AC007787.1-201ENST00000588095 1583 ntBASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 AC092127.1-201ENST00000567093 3455 ntBASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.66■□□□□ 0.1
TBC1D3BA6NDS4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 AL354989.2-201ENST00000435838 1540 ntBASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 AL645937.2-201ENST00000396808 931 ntBASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 BTBD6P1-201ENST00000412176 1267 ntBASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 FAM86HP-204ENST00000513466 959 ntBASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TBC1D3BA6NDS4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms