Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRDV1A0A1B0GX56 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 RPS2P28-201ENST00000314255 741 ntBASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 AC018712.1-201ENST00000455767 687 ntBASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRDV1A0A1B0GX56 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
TRDV1A0A1B0GX56 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 AC012508.2-201ENST00000567613 1472 ntBASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms