Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC22.76■■□□□ 1.23
CDC42BPBQ9Y5S2 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDC42BPBQ9Y5S2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 AC090616.6-203ENST00000579186 1945 ntBASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 HPN-206ENST00000597419 1212 ntTSL 5 BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 AC023090.2-201ENST00000625182 2110 ntBASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC22.75■■□□□ 1.23
CDC42BPBQ9Y5S2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 RPL13AP19-201ENST00000434320 584 ntBASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 NAGK-204ENST00000443872 878 ntTSL 3 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 AC012441.2-201ENST00000444843 739 ntBASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 AC114501.1-201ENST00000445949 172 ntBASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 FOS-204ENST00000554617 796 ntTSL 2 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDC42BPBQ9Y5S2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 KRT18P66-201ENST00000452970 1269 ntBASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 RN7SL258P-201ENST00000478664 300 ntBASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 GCOM2-201ENST00000509133 1104 ntBASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDC42BPBQ9Y5S2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 RNA5SP359-201ENST00000364838 113 ntBASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 CICP12-201ENST00000455801 843 ntBASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 AC008825.2-201ENST00000603374 718 ntBASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms