Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 AL121723.1-201ENST00000445194 1519 ntBASIC20.91■□□□□ 0.94
USP35Q9P2H5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 BX284668.4-201ENST00000453917 508 ntBASIC20.91■□□□□ 0.94
USP35Q9P2H5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP35Q9P2H5 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP35Q9P2H5 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP35Q9P2H5 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 NAT9-224ENST00000583757 583 ntTSL 3 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 AC145423.3-201ENST00000615987 467 ntBASIC20.91■□□□□ 0.94
USP35Q9P2H5 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP35Q9P2H5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP35Q9P2H5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP35Q9P2H5 AC144831.1-201ENST00000573312 2656 ntBASIC20.91■□□□□ 0.94
USP35Q9P2H5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.91■□□□□ 0.94
USP35Q9P2H5 TCAF2P1-201ENST00000291129 2421 ntBASIC20.9■□□□□ 0.94
USP35Q9P2H5 FES-204ENST00000414248 2327 ntTSL 2 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP35Q9P2H5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP35Q9P2H5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP35Q9P2H5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP35Q9P2H5 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP35Q9P2H5 DRD5P1-201ENST00000456605 1438 ntBASIC20.9■□□□□ 0.94
USP35Q9P2H5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP35Q9P2H5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP35Q9P2H5 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.9■□□□□ 0.94
USP35Q9P2H5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP35Q9P2H5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 AC091804.1-201ENST00000486888 567 ntBASIC20.9■□□□□ 0.94
USP35Q9P2H5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 AL096828.3-201ENST00000615354 462 ntBASIC20.9■□□□□ 0.94
USP35Q9P2H5 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP35Q9P2H5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP35Q9P2H5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP35Q9P2H5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
USP35Q9P2H5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
USP35Q9P2H5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.89■□□□□ 0.94
USP35Q9P2H5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
USP35Q9P2H5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.89■□□□□ 0.94
USP35Q9P2H5 AC018735.1-201ENST00000437208 1502 ntBASIC20.89■□□□□ 0.94
USP35Q9P2H5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
USP35Q9P2H5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
USP35Q9P2H5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP35Q9P2H5 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP35Q9P2H5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP35Q9P2H5 AC134407.2-201ENST00000625089 1978 ntBASIC20.89■□□□□ 0.93
USP35Q9P2H5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP35Q9P2H5 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP35Q9P2H5 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP35Q9P2H5 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 AC026410.3-201ENST00000514280 936 ntBASIC20.89■□□□□ 0.93
USP35Q9P2H5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 MIR4722-201ENST00000578292 60 ntBASIC20.89■□□□□ 0.93
USP35Q9P2H5 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP35Q9P2H5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP35Q9P2H5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP35Q9P2H5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP35Q9P2H5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
USP35Q9P2H5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP35Q9P2H5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP35Q9P2H5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP35Q9P2H5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP35Q9P2H5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP35Q9P2H5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP35Q9P2H5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms