Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 AL139094.1-201ENST00000405549 1188 ntBASIC16.59■□□□□ 0.25
CNTN3Q9P232 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 KRT223P-202ENST00000449164 1292 ntBASIC16.59■□□□□ 0.25
CNTN3Q9P232 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 KRT90P-201ENST00000549264 1064 ntBASIC16.59■□□□□ 0.25
CNTN3Q9P232 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 AC025279.2-201ENST00000569730 653 ntBASIC16.59■□□□□ 0.25
CNTN3Q9P232 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 AC244669.2-201ENST00000612320 853 ntBASIC16.59■□□□□ 0.25
CNTN3Q9P232 AC133552.6-201ENST00000613406 534 ntBASIC16.59■□□□□ 0.25
CNTN3Q9P232 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 AC144831.1-201ENST00000573312 2656 ntBASIC16.59■□□□□ 0.25
CNTN3Q9P232 AL138709.1-201ENST00000614840 1693 ntBASIC16.59■□□□□ 0.25
CNTN3Q9P232 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNTN3Q9P232 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CNTN3Q9P232 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNTN3Q9P232 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CNTN3Q9P232 GHSR-202ENST00000427970 912 ntBASIC16.58■□□□□ 0.24
CNTN3Q9P232 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.58■□□□□ 0.24
CNTN3Q9P232 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.58■□□□□ 0.24
CNTN3Q9P232 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CNTN3Q9P232 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.58■□□□□ 0.24
CNTN3Q9P232 AC145423.3-201ENST00000615987 467 ntBASIC16.58■□□□□ 0.24
CNTN3Q9P232 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTN3Q9P232 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.58■□□□□ 0.24
CNTN3Q9P232 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.58■□□□□ 0.24
CNTN3Q9P232 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTN3Q9P232 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CNTN3Q9P232 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.58■□□□□ 0.24
CNTN3Q9P232 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CNTN3Q9P232 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTN3Q9P232 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 AC023824.1-201ENST00000562945 2975 ntBASIC16.57■□□□□ 0.24
CNTN3Q9P232 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 AC022532.1-201ENST00000624563 1728 ntBASIC16.57■□□□□ 0.24
CNTN3Q9P232 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 KRT8P14-201ENST00000414254 1442 ntBASIC16.57■□□□□ 0.24
CNTN3Q9P232 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.57■□□□□ 0.24
CNTN3Q9P232 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 C2orf27AP3-201ENST00000434123 579 ntBASIC16.57■□□□□ 0.24
CNTN3Q9P232 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNTN3Q9P232 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.57■□□□□ 0.24
CNTN3Q9P232 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms