Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 KRT18P32-201ENST00000424695 1287 ntBASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 GPS2P2-201ENST00000430745 888 ntBASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 POU5F1P6-201ENST00000466990 990 ntBASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 AC067863.1-201ENST00000494933 530 ntBASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 SLC25A39P2-201ENST00000537614 270 ntBASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CALCOCO1Q9P1Z2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 AL589702.1-201ENST00000641229 1509 ntBASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 DUX4L27-201ENST00000554796 1261 ntBASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 AL390955.2-201ENST00000603032 514 ntBASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 AL592424.1-201ENST00000563624 1536 ntBASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.06■□□□□ 0.32
CALCOCO1Q9P1Z2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms