Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN4Q9NRR5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 TSPY16P-201ENST00000449843 468 ntBASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 AC023310.3-201ENST00000557027 670 ntBASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 AC100756.1-201ENST00000562736 682 ntBASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 AC138749.3-201ENST00000567691 622 ntBASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 AC116165.1-201ENST00000611806 668 ntBASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 AC023024.2-201ENST00000623561 1993 ntBASIC14.27□□□□□ -0.13
UBQLN4Q9NRR5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 FAM207CP-201ENST00000443486 507 ntBASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 SPCS2P1-201ENST00000561636 679 ntBASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 CICP11-201ENST00000434745 2827 ntBASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN4Q9NRR5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 MIR600HG-201ENST00000449175 5984 ntBASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 CLK3P2-201ENST00000427566 1453 ntBASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms