Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 SPDYE19P-201ENST00000338590 713 ntBASIC13.62□□□□□ -0.23
CDH20Q9HBT6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 AC092337.1-201ENST00000568699 1129 ntBASIC13.62□□□□□ -0.23
CDH20Q9HBT6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH20Q9HBT6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 MEP1AP4-201ENST00000423244 1087 ntBASIC13.61□□□□□ -0.23
CDH20Q9HBT6 KRT18P64-201ENST00000434946 1219 ntBASIC13.61□□□□□ -0.23
CDH20Q9HBT6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 KRT18P43-201ENST00000469825 1281 ntBASIC13.61□□□□□ -0.23
CDH20Q9HBT6 SERBP1P5-201ENST00000510079 1181 ntBASIC13.61□□□□□ -0.23
CDH20Q9HBT6 SPDYE18-201ENST00000510091 1050 ntBASIC13.61□□□□□ -0.23
CDH20Q9HBT6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 LINC02560-201ENST00000596379 459 ntBASIC13.61□□□□□ -0.23
CDH20Q9HBT6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 AC127383.1-201ENST00000444697 1800 ntBASIC13.61□□□□□ -0.23
CDH20Q9HBT6 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 AC138969.3-201ENST00000546612 1459 ntBASIC13.61□□□□□ -0.23
CDH20Q9HBT6 AC138932.2-201ENST00000548268 1459 ntBASIC13.61□□□□□ -0.23
CDH20Q9HBT6 AC126755.4-201ENST00000549796 1459 ntBASIC13.61□□□□□ -0.23
CDH20Q9HBT6 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH20Q9HBT6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms