Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIPK3Q9H422 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HIPK3Q9H422 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIPK3Q9H422 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 AL354877.1-201ENST00000424412 413 ntBASIC16.81■□□□□ 0.28
HIPK3Q9H422 HIST2H2BB-201ENST00000449108 381 ntBASIC16.81■□□□□ 0.28
HIPK3Q9H422 AC021723.1-201ENST00000486306 515 ntBASIC16.81■□□□□ 0.28
HIPK3Q9H422 AL391280.1-201ENST00000506969 1062 ntBASIC16.81■□□□□ 0.28
HIPK3Q9H422 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 AC022217.1-201ENST00000521069 738 ntBASIC16.81■□□□□ 0.28
HIPK3Q9H422 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 MIR3907-201ENST00000579424 151 ntBASIC16.81■□□□□ 0.28
HIPK3Q9H422 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIPK3Q9H422 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIPK3Q9H422 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HIPK3Q9H422 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
HIPK3Q9H422 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 CROCCP1-201ENST00000426910 5675 ntBASIC16.8■□□□□ 0.28
HIPK3Q9H422 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 POM121L8P-201ENST00000417732 1281 ntBASIC16.8■□□□□ 0.28
HIPK3Q9H422 EIF3FP3-201ENST00000434851 1086 ntBASIC16.8■□□□□ 0.28
HIPK3Q9H422 AC011742.3-201ENST00000439053 820 ntBASIC16.8■□□□□ 0.28
HIPK3Q9H422 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 POM121L9P-203ENST00000441984 1285 ntBASIC16.8■□□□□ 0.28
HIPK3Q9H422 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 AL645939.5-201ENST00000606834 243 ntBASIC16.8■□□□□ 0.28
HIPK3Q9H422 MIR7845-201ENST00000618396 99 ntBASIC16.8■□□□□ 0.28
HIPK3Q9H422 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 AC079336.7-201ENST00000623428 1078 ntBASIC16.8■□□□□ 0.28
HIPK3Q9H422 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 AC022188.1-201ENST00000620960 1664 ntBASIC16.8■□□□□ 0.28
HIPK3Q9H422 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HIPK3Q9H422 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIPK3Q9H422 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
HIPK3Q9H422 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.79■□□□□ 0.28
HIPK3Q9H422 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK3Q9H422 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK3Q9H422 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK3Q9H422 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
HIPK3Q9H422 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK3Q9H422 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK3Q9H422 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK3Q9H422 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK3Q9H422 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.79■□□□□ 0.28
HIPK3Q9H422 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HIPK3Q9H422 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK3Q9H422 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIPK3Q9H422 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.79■□□□□ 0.28
HIPK3Q9H422 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HIPK3Q9H422 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HIPK3Q9H422 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.79■□□□□ 0.28
HIPK3Q9H422 AC100850.1-201ENST00000506768 649 ntBASIC16.79■□□□□ 0.28
HIPK3Q9H422 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.79■□□□□ 0.28
HIPK3Q9H422 AP003171.2-201ENST00000528208 925 ntBASIC16.79■□□□□ 0.28
HIPK3Q9H422 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.79■□□□□ 0.28
HIPK3Q9H422 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.79■□□□□ 0.28
HIPK3Q9H422 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms