Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 HLA-H-201ENST00000383620 1096 ntBASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 MIR4453-201ENST00000584019 89 ntBASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 AF228730.6-201ENST00000641497 218 ntBASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 AC084121.3-201ENST00000641716 218 ntBASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 AC105233.6-201ENST00000642093 218 ntBASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXP3Q9BZS1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 AC097493.3-201ENST00000509725 367 ntBASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 OR2I1P-209ENST00000641730 5365 ntBASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXP3Q9BZS1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms