Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 ERP29P1-201ENST00000442902 706 ntBASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 B9D1-206ENST00000461069 923 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 AC092896.1-201ENST00000465850 380 ntBASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 OR2A1-AS1-203ENST00000468575 568 ntBASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 RN7SL672P-201ENST00000474091 317 ntBASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 ISL1-203ENST00000511384 981 ntTSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 MIR2278-201ENST00000516344 96 ntBASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 AL138725.1-201ENST00000407347 1314 ntBASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 AL360270.3-201ENST00000609118 1348 ntBASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 RNA5SP359-201ENST00000364838 113 ntBASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 SNRPCP15-201ENST00000424055 192 ntBASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 HNRNPA1P59-201ENST00000430583 918 ntBASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 STK24P1-201ENST00000455035 1291 ntBASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 TPT1P11-201ENST00000458482 498 ntBASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 RN7SL87P-201ENST00000497657 288 ntBASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 TRMT112P3-201ENST00000580149 358 ntBASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
COL25A1Q9BXS0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms