Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 AL353135.1-201ENST00000606729 504 ntBASIC14.66□□□□□ -0.06
NR1H4Q96RI1 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 AC134407.2-201ENST00000625089 1978 ntBASIC14.65□□□□□ -0.06
NR1H4Q96RI1 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.65□□□□□ -0.06
NR1H4Q96RI1 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 SPDYE21P-201ENST00000413323 827 ntBASIC14.65□□□□□ -0.06
NR1H4Q96RI1 AC004945.1-201ENST00000416738 983 ntBASIC14.65□□□□□ -0.06
NR1H4Q96RI1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 AC246785.2-201ENST00000432512 513 ntBASIC14.65□□□□□ -0.06
NR1H4Q96RI1 PAWRP1-201ENST00000451083 565 ntBASIC14.65□□□□□ -0.06
NR1H4Q96RI1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 AC087388.1-201ENST00000571370 1112 ntBASIC14.65□□□□□ -0.06
NR1H4Q96RI1 AC011467.2-201ENST00000598425 242 ntBASIC14.65□□□□□ -0.06
NR1H4Q96RI1 AL365330.1-201ENST00000607459 531 ntBASIC14.65□□□□□ -0.06
NR1H4Q96RI1 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 NCF1C-201ENST00000438382 1427 ntBASIC14.65□□□□□ -0.06
NR1H4Q96RI1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NR1H4Q96RI1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 TP73-AS1-210ENST00000637775 1455 ntBASIC14.64□□□□□ -0.07
NR1H4Q96RI1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 AC018529.2-202ENST00000611482 3087 ntBASIC14.64□□□□□ -0.07
NR1H4Q96RI1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms