Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 RN7SL752P-201ENST00000463779 287 ntBASIC13.75□□□□□ -0.21
APH1AQ96BI3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 AL596325.1-201ENST00000563991 1082 ntBASIC13.75□□□□□ -0.21
APH1AQ96BI3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 CTBP2P3-201ENST00000585629 1255 ntBASIC13.75□□□□□ -0.21
APH1AQ96BI3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 AC133539.2-201ENST00000604757 467 ntBASIC13.75□□□□□ -0.21
APH1AQ96BI3 AC012645.4-201ENST00000610691 1061 ntBASIC13.75□□□□□ -0.21
APH1AQ96BI3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 AC020658.6-201ENST00000623564 1870 ntBASIC13.75□□□□□ -0.21
APH1AQ96BI3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 AC090616.6-203ENST00000579186 1945 ntBASIC13.74□□□□□ -0.21
APH1AQ96BI3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 SOCS2P1-201ENST00000417727 557 ntBASIC13.74□□□□□ -0.21
APH1AQ96BI3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 AC005225.4-201ENST00000557330 545 ntBASIC13.74□□□□□ -0.21
APH1AQ96BI3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 AC025181.2-201ENST00000606994 802 ntBASIC13.74□□□□□ -0.21
APH1AQ96BI3 WFDC1-204ENST00000613603 549 ntBASIC13.74□□□□□ -0.21
APH1AQ96BI3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.74□□□□□ -0.21
APH1AQ96BI3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APH1AQ96BI3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms