Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 AL136309.1-201ENST00000403917 691 ntBASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 FTLP10-202ENST00000505798 471 ntBASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 AC138466.3-201ENST00000619983 221 ntBASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 AL603832.2-201ENST00000566195 2125 ntBASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 AC006449.5-201ENST00000610658 2098 ntBASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 CLUHP2-201ENST00000426660 1303 ntBASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 AC092127.1-201ENST00000567093 3455 ntBASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 RPL5P21-201ENST00000404620 815 ntBASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 RN7SL769P-201ENST00000469386 295 ntBASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAPGEF4Q8WZA2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAPGEF4Q8WZA2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAPGEF4Q8WZA2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.08■□□□□ 0.8
RAPGEF4Q8WZA2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAPGEF4Q8WZA2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAPGEF4Q8WZA2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAPGEF4Q8WZA2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAPGEF4Q8WZA2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAPGEF4Q8WZA2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 SDCCAG3P2-201ENST00000326105 1023 ntBASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 HLA-K-203ENST00000430151 1046 ntBASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 SPTLC1P5-201ENST00000450718 252 ntBASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 HCG18-245ENST00000602550 559 ntTSL 4 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 AC024909.3-201ENST00000611513 2257 ntBASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RAPGEF4Q8WZA2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms