Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 SLED1-202ENST00000512051 380 ntBASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 AC022145.2-201ENST00000598203 171 ntBASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 REXO1L4P-201ENST00000605109 1937 ntBASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 AC018529.2-202ENST00000611482 3087 ntBASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 AC004832.2-201ENST00000426397 482 ntBASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 FAM58DP-201ENST00000428076 619 ntBASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 HTR5BP-201ENST00000430851 1154 ntBASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 RN7SL828P-201ENST00000607615 303 ntBASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 AC105339.1-204ENST00000636249 355 ntBASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 AL645728.2-202ENST00000641679 227 ntBASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC44A1Q8WWI5 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 AC113367.3-201ENST00000508316 1912 ntBASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 AC007967.4-201ENST00000614700 386 ntBASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms