Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 AL031595.1-201ENST00000623969 4709 ntBASIC13.5□□□□□ -0.25
CCDC107Q8WV48 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.5□□□□□ -0.25
CCDC107Q8WV48 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 AC023274.1-201ENST00000418278 595 ntBASIC13.5□□□□□ -0.25
CCDC107Q8WV48 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 AL138918.1-201ENST00000568306 659 ntBASIC13.5□□□□□ -0.25
CCDC107Q8WV48 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 AC027601.4-201ENST00000611259 610 ntBASIC13.5□□□□□ -0.25
CCDC107Q8WV48 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC107Q8WV48 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.49□□□□□ -0.25
CCDC107Q8WV48 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.49□□□□□ -0.25
CCDC107Q8WV48 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.49□□□□□ -0.25
CCDC107Q8WV48 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 AC106730.1-201ENST00000566722 1090 ntBASIC13.49□□□□□ -0.25
CCDC107Q8WV48 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 MIR4321-201ENST00000592276 80 ntBASIC13.49□□□□□ -0.25
CCDC107Q8WV48 BX640515.1-201ENST00000617215 977 ntBASIC13.49□□□□□ -0.25
CCDC107Q8WV48 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC107Q8WV48 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms