Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP43Q8NFH3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 AC114501.2-201ENST00000439631 535 ntBASIC14.53□□□□□ -0.08
NUP43Q8NFH3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 AC009477.1-201ENST00000452936 217 ntBASIC14.53□□□□□ -0.08
NUP43Q8NFH3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NUP43Q8NFH3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 AC023824.1-201ENST00000562945 2975 ntBASIC14.52□□□□□ -0.08
NUP43Q8NFH3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.52□□□□□ -0.08
NUP43Q8NFH3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NUP43Q8NFH3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 AC009407.1-201ENST00000568958 598 ntBASIC14.52□□□□□ -0.09
NUP43Q8NFH3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 AC025181.2-201ENST00000606994 802 ntBASIC14.52□□□□□ -0.09
NUP43Q8NFH3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms