Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 AC067750.1-201ENST00000608826 6545 ntBASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 AKAP8P1-201ENST00000434743 1349 ntBASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 AL359183.1-201ENST00000623796 2132 ntBASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
PIK3C3Q8NEB9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 BEND3P1-201ENST00000421591 1944 ntBASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 RN7SL589P-201ENST00000481268 310 ntBASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 MIR3687-2-201ENST00000577708 61 ntBASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 MIR3687-1-201ENST00000614492 61 ntBASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 AC140479.7-201ENST00000636301 2332 ntBASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3C3Q8NEB9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms