Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC005632.3-201ENST00000605544 308 ntBASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 LINC02199-201ENST00000506655 2702 ntBASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
CCDC168Q8NDH2 AC015909.3-201ENST00000572855 1794 ntBASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 HLA-J-204ENST00000495278 958 ntBASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 FAM86KP-201ENST00000509817 987 ntBASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AL358472.3-201ENST00000608147 415 ntBASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AC011676.5-201ENST00000624864 2660 ntBASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 PSMD4P1-201ENST00000433951 1109 ntBASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 RPL7P35-201ENST00000446943 740 ntBASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 MIR4522-201ENST00000584932 87 ntBASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AC138466.5-201ENST00000624002 808 ntBASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AC005618.3-201ENST00000624928 458 ntBASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 AC060834.1-201ENST00000443027 2032 ntBASIC12.81□□□□□ -0.36
CCDC168Q8NDH2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 RCC2P8-201ENST00000502779 1035 ntBASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 AL162426.1-201ENST00000624141 743 ntBASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 AC073911.3-201ENST00000624401 631 ntBASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms