Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC50Q8IVM0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC50Q8IVM0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCDC50Q8IVM0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC50Q8IVM0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC50Q8IVM0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC50Q8IVM0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC50Q8IVM0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC50Q8IVM0 AL607033.1-201ENST00000623900 1599 ntBASIC16.46■□□□□ 0.23
CCDC50Q8IVM0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC50Q8IVM0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC50Q8IVM0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.22
CCDC50Q8IVM0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.46■□□□□ 0.22
CCDC50Q8IVM0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC50Q8IVM0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AC105021.1-202ENST00000570572 669 ntBASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 MIR4469-201ENST00000583919 79 ntBASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AL671883.3-201ENST00000603274 991 ntBASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AC097359.3-201ENST00000603982 1210 ntBASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AC018529.1-201ENST00000613063 361 ntBASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 KRT8P44-201ENST00000441609 1350 ntBASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 AC126365.1-201ENST00000578585 1514 ntBASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CCDC50Q8IVM0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 AC023024.2-201ENST00000623561 1993 ntBASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 FAM58DP-201ENST00000428076 619 ntBASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC50Q8IVM0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms