Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 AC026471.1-201ENST00000564629 3026 ntBASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 AC104457.1-201ENST00000401024 814 ntBASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 CYP46A4P-201ENST00000414953 267 ntBASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 HLA-K-203ENST00000430151 1046 ntBASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 CHMP4BP1-201ENST00000556017 588 ntBASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 DUX4L47-201ENST00000566374 394 ntBASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 AC016629.1-201ENST00000596579 586 ntBASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 AL023803.2-201ENST00000620080 638 ntBASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 CLUHP2-201ENST00000426660 1303 ntBASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 CYP2T1P-202ENST00000641596 2535 ntBASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS4Q8IUM7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 RN7SL769P-201ENST00000469386 295 ntBASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 AC091812.3-201ENST00000621362 345 ntBASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS4Q8IUM7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS4Q8IUM7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms