Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 PIN1P1-201ENST00000412108 996 ntBASIC10.37□□□□□ -0.75
SCXQ7RTU7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 AC105021.1-202ENST00000570572 669 ntBASIC10.37□□□□□ -0.75
SCXQ7RTU7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 RN7SL828P-201ENST00000607615 303 ntBASIC10.37□□□□□ -0.75
SCXQ7RTU7 TEX28P1-201ENST00000613479 1221 ntBASIC10.37□□□□□ -0.75
SCXQ7RTU7 TEX28P2-201ENST00000617764 1221 ntBASIC10.37□□□□□ -0.75
SCXQ7RTU7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SCXQ7RTU7 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.37□□□□□ -0.75
SCXQ7RTU7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SCXQ7RTU7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC10.36□□□□□ -0.75
SCXQ7RTU7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms