Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRRK2Q5S007 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRRK2Q5S007 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LRRK2Q5S007 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRK2Q5S007 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 EIF3FP3-201ENST00000434851 1086 ntBASIC13.18□□□□□ -0.3
LRRK2Q5S007 AL354861.1-201ENST00000445213 355 ntBASIC13.18□□□□□ -0.3
LRRK2Q5S007 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 AC027237.1-201ENST00000560942 655 ntBASIC13.18□□□□□ -0.3
LRRK2Q5S007 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 AC010141.1-201ENST00000411585 623 ntBASIC13.18□□□□□ -0.3
LRRK2Q5S007 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 RPS5-204ENST00000598098 536 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 SHC1P1-201ENST00000425230 1745 ntBASIC13.18□□□□□ -0.3
LRRK2Q5S007 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRK2Q5S007 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.18□□□□□ -0.3
LRRK2Q5S007 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRK2Q5S007 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 Z69890.1-201ENST00000382990 339 ntBASIC13.17□□□□□ -0.3
LRRK2Q5S007 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRK2Q5S007 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRK2Q5S007 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 AC011840.2-201ENST00000563063 1520 ntBASIC13.17□□□□□ -0.3
LRRK2Q5S007 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRK2Q5S007 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRK2Q5S007 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRK2Q5S007 NHP2-202ENST00000314397 599 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRK2Q5S007 AC004837.1-201ENST00000446267 564 ntBASIC13.17□□□□□ -0.3
LRRK2Q5S007 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRK2Q5S007 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 AL109837.1-201ENST00000603272 613 ntBASIC13.17□□□□□ -0.3
LRRK2Q5S007 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 FKBP4P6-201ENST00000457486 1332 ntBASIC13.17□□□□□ -0.3
LRRK2Q5S007 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRK2Q5S007 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRK2Q5S007 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRK2Q5S007 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms