Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC93Q567U6 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC93Q567U6 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC93Q567U6 RN7SL774P-201ENST00000577467 290 ntBASIC18.9■□□□□ 0.62
CCDC93Q567U6 AC025181.2-201ENST00000606994 802 ntBASIC18.9■□□□□ 0.62
CCDC93Q567U6 ZACNP1-201ENST00000612259 710 ntBASIC18.9■□□□□ 0.62
CCDC93Q567U6 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC93Q567U6 AC092171.3-201ENST00000610122 2651 ntBASIC18.9■□□□□ 0.62
CCDC93Q567U6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC93Q567U6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC93Q567U6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC93Q567U6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC93Q567U6 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC93Q567U6 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC93Q567U6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC93Q567U6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CCDC93Q567U6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
CCDC93Q567U6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC93Q567U6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 MIR648-201ENST00000385046 94 ntBASIC18.89■□□□□ 0.61
CCDC93Q567U6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 AC022217.1-201ENST00000521069 738 ntBASIC18.89■□□□□ 0.61
CCDC93Q567U6 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 AL353726.2-201ENST00000623259 884 ntBASIC18.89■□□□□ 0.61
CCDC93Q567U6 AC079336.7-201ENST00000623428 1078 ntBASIC18.89■□□□□ 0.61
CCDC93Q567U6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC93Q567U6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC93Q567U6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 AC005740.2-201ENST00000511085 419 ntBASIC18.88■□□□□ 0.61
CCDC93Q567U6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 MIR4313-201ENST00000580760 101 ntBASIC18.88■□□□□ 0.61
CCDC93Q567U6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 OR10B1P-201ENST00000601666 907 ntBASIC18.88■□□□□ 0.61
CCDC93Q567U6 AC073413.1-201ENST00000603927 732 ntBASIC18.88■□□□□ 0.61
CCDC93Q567U6 AL645939.5-201ENST00000606834 243 ntBASIC18.88■□□□□ 0.61
CCDC93Q567U6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC93Q567U6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC93Q567U6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC93Q567U6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CCDC93Q567U6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms