Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL16A1Q07092 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL16A1Q07092 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC20.17■□□□□ 0.82
COL16A1Q07092 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
COL16A1Q07092 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
COL16A1Q07092 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL16A1Q07092 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COL16A1Q07092 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC20.16■□□□□ 0.82
COL16A1Q07092 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC20.16■□□□□ 0.82
COL16A1Q07092 AP005212.2-201ENST00000584979 510 ntBASIC20.16■□□□□ 0.82
COL16A1Q07092 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 AC010976.2-201ENST00000609697 852 ntBASIC20.16■□□□□ 0.82
COL16A1Q07092 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.16■□□□□ 0.82
COL16A1Q07092 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC20.16■□□□□ 0.82
COL16A1Q07092 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC20.16■□□□□ 0.82
COL16A1Q07092 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
COL16A1Q07092 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC20.16■□□□□ 0.82
COL16A1Q07092 AC025183.3-201ENST00000623526 1482 ntBASIC20.16■□□□□ 0.82
COL16A1Q07092 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 AC106827.1-201ENST00000366454 431 ntBASIC20.16■□□□□ 0.82
COL16A1Q07092 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC20.16■□□□□ 0.82
COL16A1Q07092 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 AC093826.1-201ENST00000508655 993 ntBASIC20.16■□□□□ 0.82
COL16A1Q07092 GDNF-207ENST00000515058 764 ntTSL 5 BASIC20.16■□□□□ 0.82
COL16A1Q07092 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC20.16■□□□□ 0.82
COL16A1Q07092 PMEL-214ENST00000550447 901 ntTSL 3 BASIC20.16■□□□□ 0.82
COL16A1Q07092 AC068867.1-201ENST00000559855 150 ntBASIC20.16■□□□□ 0.82
COL16A1Q07092 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
COL16A1Q07092 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.16■□□□□ 0.82
COL16A1Q07092 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL16A1Q07092 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC20.15■□□□□ 0.82
COL16A1Q07092 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC20.15■□□□□ 0.82
COL16A1Q07092 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC20.15■□□□□ 0.82
COL16A1Q07092 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.15■□□□□ 0.82
COL16A1Q07092 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.15■□□□□ 0.82
COL16A1Q07092 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
COL16A1Q07092 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC20.15■□□□□ 0.82
COL16A1Q07092 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC20.15■□□□□ 0.82
COL16A1Q07092 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC20.15■□□□□ 0.82
COL16A1Q07092 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC20.15■□□□□ 0.82
COL16A1Q07092 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC20.15■□□□□ 0.82
COL16A1Q07092 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
COL16A1Q07092 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.15■□□□□ 0.82
COL16A1Q07092 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.15■□□□□ 0.82
COL16A1Q07092 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL16A1Q07092 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
COL16A1Q07092 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL16A1Q07092 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.14■□□□□ 0.82
COL16A1Q07092 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
COL16A1Q07092 AL133373.2-201ENST00000623187 2828 ntBASIC20.14■□□□□ 0.82
COL16A1Q07092 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL16A1Q07092 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL16A1Q07092 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
COL16A1Q07092 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC20.14■□□□□ 0.81
COL16A1Q07092 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC20.14■□□□□ 0.81
COL16A1Q07092 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC20.14■□□□□ 0.81
COL16A1Q07092 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC20.14■□□□□ 0.81
COL16A1Q07092 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC20.14■□□□□ 0.81
COL16A1Q07092 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC20.14■□□□□ 0.81
COL16A1Q07092 AC006483.2-201ENST00000609813 515 ntBASIC20.14■□□□□ 0.81
COL16A1Q07092 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL16A1Q07092 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.14■□□□□ 0.81
COL16A1Q07092 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL16A1Q07092 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL16A1Q07092 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL16A1Q07092 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
COL16A1Q07092 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL16A1Q07092 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC20.13■□□□□ 0.81
COL16A1Q07092 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL16A1Q07092 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL16A1Q07092 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
COL16A1Q07092 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL16A1Q07092 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL16A1Q07092 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms