Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC9.27□□□□□ -0.93
HSPG2P98160 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC9.27□□□□□ -0.93
HSPG2P98160 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC9.27□□□□□ -0.93
HSPG2P98160 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC9.27□□□□□ -0.93
HSPG2P98160 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC9.27□□□□□ -0.93
HSPG2P98160 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC9.27□□□□□ -0.93
HSPG2P98160 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
HSPG2P98160 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 BANF1P3-201ENST00000412556 261 ntBASIC9.27□□□□□ -0.93
HSPG2P98160 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC9.27□□□□□ -0.93
HSPG2P98160 AC083801.1-201ENST00000491689 358 ntBASIC9.27□□□□□ -0.93
HSPG2P98160 CD164-210ENST00000512821 964 ntTSL 2 BASIC9.27□□□□□ -0.93
HSPG2P98160 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC9.27□□□□□ -0.93
HSPG2P98160 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
HSPG2P98160 AC142086.5-202ENST00000562500 217 ntBASIC9.27□□□□□ -0.93
HSPG2P98160 AC008972.2-201ENST00000606587 494 ntBASIC9.27□□□□□ -0.93
HSPG2P98160 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.93
HSPG2P98160 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC9.27□□□□□ -0.93
HSPG2P98160 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC9.27□□□□□ -0.93
HSPG2P98160 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC9.27□□□□□ -0.93
HSPG2P98160 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
HSPG2P98160 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
HSPG2P98160 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC9.27□□□□□ -0.93
HSPG2P98160 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC9.26□□□□□ -0.93
HSPG2P98160 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC9.26□□□□□ -0.93
HSPG2P98160 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC9.26□□□□□ -0.93
HSPG2P98160 RNA5SP417-201ENST00000516459 108 ntBASIC9.26□□□□□ -0.93
HSPG2P98160 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC9.26□□□□□ -0.93
HSPG2P98160 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
HSPG2P98160 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC9.26□□□□□ -0.93
HSPG2P98160 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC9.26□□□□□ -0.93
HSPG2P98160 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC9.26□□□□□ -0.93
HSPG2P98160 AC008536.3-201ENST00000623282 1599 ntBASIC9.26□□□□□ -0.93
HSPG2P98160 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC9.26□□□□□ -0.93
HSPG2P98160 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC9.26□□□□□ -0.93
HSPG2P98160 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC9.26□□□□□ -0.93
HSPG2P98160 RN7SL81P-201ENST00000493781 261 ntBASIC9.26□□□□□ -0.93
HSPG2P98160 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC9.26□□□□□ -0.93
HSPG2P98160 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC9.26□□□□□ -0.93
HSPG2P98160 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
HSPG2P98160 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC9.26□□□□□ -0.93
HSPG2P98160 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC9.26□□□□□ -0.93
HSPG2P98160 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
HSPG2P98160 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC9.26□□□□□ -0.93
HSPG2P98160 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC9.26□□□□□ -0.93
HSPG2P98160 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
HSPG2P98160 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC9.26□□□□□ -0.93
HSPG2P98160 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC9.26□□□□□ -0.93
HSPG2P98160 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC9.26□□□□□ -0.93
HSPG2P98160 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC9.26□□□□□ -0.93
HSPG2P98160 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
HSPG2P98160 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
HSPG2P98160 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC9.26□□□□□ -0.93
HSPG2P98160 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC9.26□□□□□ -0.93
HSPG2P98160 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
HSPG2P98160 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HSPG2P98160 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC9.26□□□□□ -0.93
HSPG2P98160 PFN2-205ENST00000461868 613 ntTSL 2 BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms