Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.56■□□□□ 0.08
AP1S1P61966 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
AP1S1P61966 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.56■□□□□ 0.08
AP1S1P61966 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.56■□□□□ 0.08
AP1S1P61966 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.56■□□□□ 0.08
AP1S1P61966 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.56■□□□□ 0.08
AP1S1P61966 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.56■□□□□ 0.08
AP1S1P61966 RN7SL837P-201ENST00000463010 287 ntBASIC15.56■□□□□ 0.08
AP1S1P61966 AP001582.1-201ENST00000525856 295 ntBASIC15.56■□□□□ 0.08
AP1S1P61966 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
AP1S1P61966 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.56■□□□□ 0.08
AP1S1P61966 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.56■□□□□ 0.08
AP1S1P61966 AP001063.1-201ENST00000568332 529 ntBASIC15.56■□□□□ 0.08
AP1S1P61966 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.56■□□□□ 0.08
AP1S1P61966 AC005252.2-201ENST00000624630 1141 ntBASIC15.56■□□□□ 0.08
AP1S1P61966 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.56■□□□□ 0.08
AP1S1P61966 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.56■□□□□ 0.08
AP1S1P61966 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.56■□□□□ 0.08
AP1S1P61966 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
AP1S1P61966 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.56■□□□□ 0.08
AP1S1P61966 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
AP1S1P61966 CICP11-201ENST00000434745 2827 ntBASIC15.56■□□□□ 0.08
AP1S1P61966 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.56■□□□□ 0.08
AP1S1P61966 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S1P61966 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
AP1S1P61966 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
AP1S1P61966 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.55■□□□□ 0.08
AP1S1P61966 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.55■□□□□ 0.08
AP1S1P61966 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.55■□□□□ 0.08
AP1S1P61966 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
AP1S1P61966 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
AP1S1P61966 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 AC007787.1-201ENST00000588095 1583 ntBASIC15.55■□□□□ 0.08
AP1S1P61966 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.55■□□□□ 0.08
AP1S1P61966 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 ACKR1-201ENST00000368121 1240 ntBASIC15.55■□□□□ 0.08
AP1S1P61966 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.55■□□□□ 0.08
AP1S1P61966 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
AP1S1P61966 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
AP1S1P61966 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.55■□□□□ 0.08
AP1S1P61966 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
AP1S1P61966 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.55■□□□□ 0.08
AP1S1P61966 GAPDHP21-201ENST00000450301 1010 ntBASIC15.55■□□□□ 0.08
AP1S1P61966 KRT17P7-201ENST00000451704 1104 ntBASIC15.55■□□□□ 0.08
AP1S1P61966 AC007389.4-201ENST00000454674 793 ntBASIC15.55■□□□□ 0.08
AP1S1P61966 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.55■□□□□ 0.08
AP1S1P61966 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.55■□□□□ 0.08
AP1S1P61966 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.55■□□□□ 0.08
AP1S1P61966 AC010319.3-201ENST00000597028 470 ntBASIC15.55■□□□□ 0.08
AP1S1P61966 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.55■□□□□ 0.08
AP1S1P61966 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
AP1S1P61966 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.55■□□□□ 0.08
AP1S1P61966 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.55■□□□□ 0.08
AP1S1P61966 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S1P61966 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S1P61966 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.54■□□□□ 0.08
AP1S1P61966 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms