Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CMC4P56277 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CMC4P56277 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CMC4P56277 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CMC4P56277 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
CMC4P56277 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.54□□□□□ -0.56
CMC4P56277 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
CMC4P56277 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CMC4P56277 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
CMC4P56277 AC018695.7-201ENST00000624587 2492 ntBASIC11.53□□□□□ -0.56
CMC4P56277 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 CU639417.3-201ENST00000624240 1404 ntBASIC11.53□□□□□ -0.56
CMC4P56277 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
CMC4P56277 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
CMC4P56277 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CMC4P56277 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.53□□□□□ -0.56
CMC4P56277 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.53□□□□□ -0.56
CMC4P56277 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.53□□□□□ -0.56
CMC4P56277 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.53□□□□□ -0.56
CMC4P56277 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC11.53□□□□□ -0.56
CMC4P56277 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.53□□□□□ -0.56
CMC4P56277 AC114812.1-204ENST00000449669 728 ntBASIC11.53□□□□□ -0.56
CMC4P56277 COX20P2-201ENST00000452636 358 ntBASIC11.53□□□□□ -0.56
CMC4P56277 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.53□□□□□ -0.56
CMC4P56277 CR383656.12-201ENST00000549567 513 ntBASIC11.53□□□□□ -0.56
CMC4P56277 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.53□□□□□ -0.56
CMC4P56277 AC120045.2-201ENST00000567334 178 ntBASIC11.53□□□□□ -0.56
CMC4P56277 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.53□□□□□ -0.56
CMC4P56277 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.53□□□□□ -0.56
CMC4P56277 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.53□□□□□ -0.56
CMC4P56277 CHCHD2P3-201ENST00000603038 451 ntBASIC11.53□□□□□ -0.56
CMC4P56277 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC11.53□□□□□ -0.56
CMC4P56277 BX539320.1-201ENST00000623759 877 ntBASIC11.53□□□□□ -0.56
CMC4P56277 AL603764.1-201ENST00000636452 321 ntBASIC11.53□□□□□ -0.56
CMC4P56277 AL033527.5-201ENST00000641382 801 ntBASIC11.53□□□□□ -0.56
CMC4P56277 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CMC4P56277 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CMC4P56277 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.53□□□□□ -0.56
CMC4P56277 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.53□□□□□ -0.56
CMC4P56277 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.53□□□□□ -0.56
CMC4P56277 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.53□□□□□ -0.56
CMC4P56277 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CMC4P56277 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CMC4P56277 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.53□□□□□ -0.56
CMC4P56277 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
CMC4P56277 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
CMC4P56277 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.52□□□□□ -0.56
CMC4P56277 DRD5P1-201ENST00000456605 1438 ntBASIC11.52□□□□□ -0.56
CMC4P56277 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
CMC4P56277 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CMC4P56277 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CMC4P56277 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CMC4P56277 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.52□□□□□ -0.56
CMC4P56277 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CMC4P56277 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CMC4P56277 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
CMC4P56277 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
CMC4P56277 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms