Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FOXG1P55316 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FOXG1P55316 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
FOXG1P55316 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXG1P55316 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXG1P55316 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXG1P55316 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXG1P55316 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
FOXG1P55316 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXG1P55316 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXG1P55316 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
FOXG1P55316 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.55□□□□□ -0.24
FOXG1P55316 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXG1P55316 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXG1P55316 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXG1P55316 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
FOXG1P55316 TDH-203ENST00000531764 1110 ntBASIC13.55□□□□□ -0.24
FOXG1P55316 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXG1P55316 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.55□□□□□ -0.24
FOXG1P55316 MIR5189-201ENST00000577370 114 ntBASIC13.55□□□□□ -0.24
FOXG1P55316 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXG1P55316 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXG1P55316 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXG1P55316 AC093813.1-201ENST00000605066 256 ntBASIC13.55□□□□□ -0.24
FOXG1P55316 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 AC138035.3-201ENST00000622706 2791 ntBASIC13.55□□□□□ -0.24
FOXG1P55316 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXG1P55316 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXG1P55316 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXG1P55316 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
FOXG1P55316 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXG1P55316 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
FOXG1P55316 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
FOXG1P55316 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.54□□□□□ -0.24
FOXG1P55316 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 AC091951.1-201ENST00000512854 2465 ntBASIC13.54□□□□□ -0.24
FOXG1P55316 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.54□□□□□ -0.24
FOXG1P55316 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 AC144831.1-201ENST00000573312 2656 ntBASIC13.54□□□□□ -0.24
FOXG1P55316 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.54□□□□□ -0.24
FOXG1P55316 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.54□□□□□ -0.24
FOXG1P55316 AL162727.3-201ENST00000635661 2787 ntBASIC13.54□□□□□ -0.24
FOXG1P55316 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.54□□□□□ -0.24
FOXG1P55316 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.54□□□□□ -0.24
FOXG1P55316 ACTG1P3-201ENST00000431775 1114 ntBASIC13.54□□□□□ -0.24
FOXG1P55316 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.54□□□□□ -0.24
FOXG1P55316 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.54□□□□□ -0.24
FOXG1P55316 AC007389.4-201ENST00000454674 793 ntBASIC13.54□□□□□ -0.24
FOXG1P55316 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.54□□□□□ -0.24
FOXG1P55316 USP32P1-208ENST00000506594 1164 ntBASIC13.54□□□□□ -0.24
FOXG1P55316 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.54□□□□□ -0.24
FOXG1P55316 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.54□□□□□ -0.24
FOXG1P55316 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.54□□□□□ -0.24
FOXG1P55316 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.54□□□□□ -0.24
FOXG1P55316 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms