Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PDX1P52945 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.07■□□□□ 0
PDX1P52945 AC009486.1-201ENST00000569860 813 ntBASIC15.07■□□□□ 0
PDX1P52945 GNRHR2-203ENST00000581100 1187 ntBASIC15.07■□□□□ 0
PDX1P52945 AL450472.2-201ENST00000603663 1156 ntBASIC15.07■□□□□ 0
PDX1P52945 AC244669.2-201ENST00000612320 853 ntBASIC15.07■□□□□ 0
PDX1P52945 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.07■□□□□ 0
PDX1P52945 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.07■□□□□ 0
PDX1P52945 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PDX1P52945 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PDX1P52945 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.07■□□□□ 0
PDX1P52945 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PDX1P52945 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.07■□□□□ 0
PDX1P52945 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PDX1P52945 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PDX1P52945 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PDX1P52945 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PDX1P52945 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PDX1P52945 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.06■□□□□ 0
PDX1P52945 HAUS4P1-201ENST00000406739 1145 ntBASIC15.06■□□□□ 0
PDX1P52945 AC093433.1-201ENST00000458048 571 ntBASIC15.06■□□□□ 0
PDX1P52945 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.06■□□□□ 0
PDX1P52945 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.06■□□□□ 0
PDX1P52945 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.06■□□□□ 0
PDX1P52945 KRT90P-201ENST00000549264 1064 ntBASIC15.06■□□□□ 0
PDX1P52945 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.06■□□□□ 0
PDX1P52945 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.06■□□□□ 0
PDX1P52945 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.06■□□□□ 0
PDX1P52945 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.06■□□□□ 0
PDX1P52945 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.06■□□□□ 0
PDX1P52945 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PDX1P52945 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.06■□□□□ 0
PDX1P52945 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.06■□□□□ 0
PDX1P52945 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.06■□□□□ 0
PDX1P52945 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.06■□□□□ 0
PDX1P52945 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.06■□□□□ 0
PDX1P52945 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 AC134312.5-201ENST00000568031 1313 ntBASIC15.06■□□□□ 0
PDX1P52945 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
PDX1P52945 AC020907.1-201ENST00000616460 1350 ntBASIC15.06■□□□□ 0
PDX1P52945 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PDX1P52945 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.06■□□□□ 0
PDX1P52945 AL121723.1-201ENST00000445194 1519 ntBASIC15.06■□□□□ 0
PDX1P52945 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.06■□□□□ 0
PDX1P52945 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 AL607033.1-201ENST00000623900 1599 ntBASIC15.06■□□□□ 0
PDX1P52945 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.06■□□□□ 0
PDX1P52945 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.06■□□□□ 0
PDX1P52945 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDX1P52945 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.05■□□□□ 0
PDX1P52945 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDX1P52945 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.05■□□□□ 0
PDX1P52945 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
PDX1P52945 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDX1P52945 AP003680.1-201ENST00000598970 3660 ntBASIC15.05■□□□□ 0
PDX1P52945 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDX1P52945 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
PDX1P52945 AC063926.3-201ENST00000624734 5658 ntBASIC15.05■□□□□ 0
PDX1P52945 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDX1P52945 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDX1P52945 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDX1P52945 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
PDX1P52945 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
PDX1P52945 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDX1P52945 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDX1P52945 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.05■□□□□ 0
PDX1P52945 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDX1P52945 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.05■□□□□ -0
PDX1P52945 BRWD1P1-201ENST00000401091 371 ntBASIC15.05■□□□□ -0
PDX1P52945 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.05■□□□□ -0
PDX1P52945 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.05■□□□□ -0
PDX1P52945 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDX1P52945 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.05■□□□□ -0
PDX1P52945 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.05■□□□□ -0
PDX1P52945 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.05■□□□□ -0
PDX1P52945 AP001063.1-201ENST00000568332 529 ntBASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms