Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC15.28■□□□□ 0.04
GTF2A1P52655 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GTF2A1P52655 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 MIR497HG-202ENST00000572453 3838 ntBASIC15.28■□□□□ 0.04
GTF2A1P52655 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.28■□□□□ 0.04
GTF2A1P52655 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
GTF2A1P52655 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
GTF2A1P52655 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 AC134407.2-201ENST00000625089 1978 ntBASIC15.27■□□□□ 0.04
GTF2A1P52655 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.27■□□□□ 0.04
GTF2A1P52655 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
GTF2A1P52655 AC097374.2-201ENST00000618617 1306 ntBASIC15.27■□□□□ 0.04
GTF2A1P52655 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
GTF2A1P52655 MYCLP1-201ENST00000372451 1075 ntBASIC15.27■□□□□ 0.04
GTF2A1P52655 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GTF2A1P52655 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GTF2A1P52655 IGHV3-52-201ENST00000519770 353 ntBASIC15.27■□□□□ 0.04
GTF2A1P52655 AL441883.1-201ENST00000566170 1045 ntBASIC15.27■□□□□ 0.04
GTF2A1P52655 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.27■□□□□ 0.04
GTF2A1P52655 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.27■□□□□ 0.04
GTF2A1P52655 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GTF2A1P52655 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GTF2A1P52655 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GTF2A1P52655 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
GTF2A1P52655 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.27■□□□□ 0.03
GTF2A1P52655 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.27■□□□□ 0.03
GTF2A1P52655 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC15.27■□□□□ 0.03
GTF2A1P52655 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC15.27■□□□□ 0.03
GTF2A1P52655 ZBED1P1-201ENST00000502364 1930 ntBASIC15.27■□□□□ 0.03
GTF2A1P52655 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
GTF2A1P52655 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
GTF2A1P52655 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GTF2A1P52655 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GTF2A1P52655 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GTF2A1P52655 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GTF2A1P52655 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
GTF2A1P52655 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GTF2A1P52655 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.26■□□□□ 0.03
GTF2A1P52655 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.26■□□□□ 0.03
GTF2A1P52655 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 AC004945.1-201ENST00000416738 983 ntBASIC15.26■□□□□ 0.03
GTF2A1P52655 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.26■□□□□ 0.03
GTF2A1P52655 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.26■□□□□ 0.03
GTF2A1P52655 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 MIR4497-201ENST00000583208 89 ntBASIC15.26■□□□□ 0.03
GTF2A1P52655 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.26■□□□□ 0.03
GTF2A1P52655 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC15.26■□□□□ 0.03
GTF2A1P52655 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms