Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 FTH1P14-201ENST00000482930 551 ntBASIC17.07■□□□□ 0.32
GPC3P51654 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.07■□□□□ 0.32
GPC3P51654 AC025181.2-201ENST00000606994 802 ntBASIC17.07■□□□□ 0.32
GPC3P51654 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC3P51654 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.07■□□□□ 0.32
GPC3P51654 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.07■□□□□ 0.32
GPC3P51654 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
GPC3P51654 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC3P51654 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.07■□□□□ 0.32
GPC3P51654 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 AL513477.1-201ENST00000602865 2407 ntBASIC17.07■□□□□ 0.32
GPC3P51654 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC3P51654 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 AC092384.3-202ENST00000564646 2873 ntBASIC17.07■□□□□ 0.32
GPC3P51654 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC3P51654 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GPC3P51654 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GPC3P51654 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC3P51654 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.06■□□□□ 0.32
GPC3P51654 BNIP3P42-201ENST00000454982 569 ntBASIC17.06■□□□□ 0.32
GPC3P51654 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.06■□□□□ 0.32
GPC3P51654 BNIP3P29-201ENST00000598302 571 ntBASIC17.06■□□□□ 0.32
GPC3P51654 AC011447.5-201ENST00000616168 564 ntBASIC17.06■□□□□ 0.32
GPC3P51654 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC3P51654 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC3P51654 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.06■□□□□ 0.32
GPC3P51654 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GPC3P51654 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC3P51654 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 AC127383.1-201ENST00000444697 1800 ntBASIC17.05■□□□□ 0.32
GPC3P51654 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
GPC3P51654 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GPC3P51654 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GPC3P51654 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.05■□□□□ 0.32
GPC3P51654 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC3P51654 TMBIM7P-203ENST00000641617 1718 ntBASIC17.05■□□□□ 0.32
GPC3P51654 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC3P51654 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC3P51654 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GPC3P51654 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
GPC3P51654 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.05■□□□□ 0.32
GPC3P51654 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.05■□□□□ 0.32
GPC3P51654 AC007551.1-201ENST00000457394 519 ntBASIC17.05■□□□□ 0.32
GPC3P51654 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.05■□□□□ 0.32
GPC3P51654 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.05■□□□□ 0.32
GPC3P51654 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.05■□□□□ 0.32
GPC3P51654 GNRHR2-203ENST00000581100 1187 ntBASIC17.05■□□□□ 0.32
GPC3P51654 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.05■□□□□ 0.32
GPC3P51654 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GPC3P51654 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 AC136621.1-201ENST00000624017 2304 ntBASIC17.05■□□□□ 0.32
GPC3P51654 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
GPC3P51654 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC3P51654 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.05■□□□□ 0.32
GPC3P51654 AC009090.5-201ENST00000624886 2285 ntBASIC17.05■□□□□ 0.32
GPC3P51654 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms