Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.84■□□□□ 0.45
CTCFP49711 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.84■□□□□ 0.45
CTCFP49711 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CTCFP49711 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.84■□□□□ 0.45
CTCFP49711 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTCFP49711 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.84■□□□□ 0.45
CTCFP49711 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CTCFP49711 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTCFP49711 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.84■□□□□ 0.45
CTCFP49711 ALG1L6P-201ENST00000515248 758 ntBASIC17.84■□□□□ 0.45
CTCFP49711 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CTCFP49711 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
CTCFP49711 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.84■□□□□ 0.45
CTCFP49711 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.84■□□□□ 0.45
CTCFP49711 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTCFP49711 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTCFP49711 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CTCFP49711 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTCFP49711 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CTCFP49711 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTCFP49711 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CTCFP49711 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTCFP49711 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTCFP49711 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTCFP49711 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.83■□□□□ 0.45
CTCFP49711 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTCFP49711 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.83■□□□□ 0.45
CTCFP49711 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CTCFP49711 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTCFP49711 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTCFP49711 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.83■□□□□ 0.45
CTCFP49711 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.83■□□□□ 0.45
CTCFP49711 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTCFP49711 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
CTCFP49711 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CTCFP49711 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTCFP49711 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTCFP49711 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTCFP49711 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTCFP49711 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CTCFP49711 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTCFP49711 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTCFP49711 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CTCFP49711 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.83■□□□□ 0.44
CTCFP49711 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.83■□□□□ 0.44
CTCFP49711 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTCFP49711 ACTBP7-201ENST00000418351 1124 ntBASIC17.83■□□□□ 0.44
CTCFP49711 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CTCFP49711 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.83■□□□□ 0.44
CTCFP49711 PSMD4P1-201ENST00000433951 1109 ntBASIC17.83■□□□□ 0.44
CTCFP49711 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.83■□□□□ 0.44
CTCFP49711 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
CTCFP49711 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.83■□□□□ 0.44
CTCFP49711 AL136295.7-201ENST00000619226 1200 ntBASIC17.83■□□□□ 0.44
CTCFP49711 MIR6858-201ENST00000620733 67 ntBASIC17.83■□□□□ 0.44
CTCFP49711 AL161773.1-201ENST00000624845 863 ntBASIC17.83■□□□□ 0.44
CTCFP49711 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.83■□□□□ 0.44
CTCFP49711 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTCFP49711 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTCFP49711 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTCFP49711 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.83■□□□□ 0.44
CTCFP49711 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTCFP49711 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTCFP49711 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CTCFP49711 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.83■□□□□ 0.44
CTCFP49711 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTCFP49711 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.83■□□□□ 0.44
CTCFP49711 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CTCFP49711 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.83■□□□□ 0.44
CTCFP49711 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.83■□□□□ 0.44
CTCFP49711 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTCFP49711 UBALD1-205ENST00000590891 2641 ntBASIC17.83■□□□□ 0.44
CTCFP49711 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTCFP49711 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.82■□□□□ 0.44
CTCFP49711 FLJ38576-201ENST00000623820 2459 ntBASIC17.82■□□□□ 0.44
CTCFP49711 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
CTCFP49711 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTCFP49711 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CTCFP49711 PCDHA14-201ENST00000506751 2298 ntBASIC17.82■□□□□ 0.44
CTCFP49711 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CTCFP49711 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CTCFP49711 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTCFP49711 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTCFP49711 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTCFP49711 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.82■□□□□ 0.44
CTCFP49711 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTCFP49711 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.82■□□□□ 0.44
CTCFP49711 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.82■□□□□ 0.44
CTCFP49711 POU5F1P6-201ENST00000466990 990 ntBASIC17.82■□□□□ 0.44
CTCFP49711 AC100850.1-201ENST00000506768 649 ntBASIC17.82■□□□□ 0.44
CTCFP49711 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CTCFP49711 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.82■□□□□ 0.44
CTCFP49711 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTCFP49711 AC138894.2-201ENST00000602838 371 ntBASIC17.82■□□□□ 0.44
CTCFP49711 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.82■□□□□ 0.44
CTCFP49711 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CTCFP49711 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTCFP49711 OR6D1P-203ENST00000641209 4860 ntBASIC17.82■□□□□ 0.44
CTCFP49711 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.82■□□□□ 0.44
CTCFP49711 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms