Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.25□□□□□ -0.13
RFC3P40938 AC018665.1-201ENST00000622927 1362 ntBASIC14.25□□□□□ -0.13
RFC3P40938 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
RFC3P40938 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.25□□□□□ -0.13
RFC3P40938 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RFC3P40938 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.25□□□□□ -0.13
RFC3P40938 SNX29P1-201ENST00000548357 1007 ntBASIC14.25□□□□□ -0.13
RFC3P40938 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.25□□□□□ -0.13
RFC3P40938 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.25□□□□□ -0.13
RFC3P40938 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.25□□□□□ -0.13
RFC3P40938 MIR4313-201ENST00000580760 101 ntBASIC14.25□□□□□ -0.13
RFC3P40938 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.25□□□□□ -0.13
RFC3P40938 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.25□□□□□ -0.13
RFC3P40938 MIR6805-201ENST00000615055 62 ntBASIC14.25□□□□□ -0.13
RFC3P40938 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.25□□□□□ -0.13
RFC3P40938 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.25□□□□□ -0.13
RFC3P40938 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RFC3P40938 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.25□□□□□ -0.13
RFC3P40938 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RFC3P40938 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RFC3P40938 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RFC3P40938 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.25□□□□□ -0.13
RFC3P40938 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFC3P40938 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.24□□□□□ -0.13
RFC3P40938 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.24□□□□□ -0.13
RFC3P40938 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.24□□□□□ -0.13
RFC3P40938 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 C1QBPP1-201ENST00000400117 770 ntBASIC14.24□□□□□ -0.13
RFC3P40938 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 SOCS2P1-201ENST00000417727 557 ntBASIC14.24□□□□□ -0.13
RFC3P40938 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.24□□□□□ -0.13
RFC3P40938 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RFC3P40938 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFC3P40938 AC022210.1-201ENST00000449856 793 ntBASIC14.24□□□□□ -0.13
RFC3P40938 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.24□□□□□ -0.13
RFC3P40938 KRT18P43-201ENST00000469825 1281 ntBASIC14.24□□□□□ -0.13
RFC3P40938 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.24□□□□□ -0.13
RFC3P40938 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 AC120045.2-201ENST00000567334 178 ntBASIC14.24□□□□□ -0.13
RFC3P40938 MIR5189-201ENST00000577370 114 ntBASIC14.24□□□□□ -0.13
RFC3P40938 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.24□□□□□ -0.13
RFC3P40938 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.24□□□□□ -0.13
RFC3P40938 MIR6752-201ENST00000618442 71 ntBASIC14.24□□□□□ -0.13
RFC3P40938 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms