Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 LINC02447-202ENST00000501888 2146 ntBASIC19.52■□□□□ 0.72
ATP6V1AP38606 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V1AP38606 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V1AP38606 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V1AP38606 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V1AP38606 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V1AP38606 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V1AP38606 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V1AP38606 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V1AP38606 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V1AP38606 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 AC007274.2-201ENST00000421675 662 ntBASIC19.52■□□□□ 0.72
ATP6V1AP38606 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V1AP38606 AF254983.2-201ENST00000612331 135 ntBASIC19.52■□□□□ 0.72
ATP6V1AP38606 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 AL645728.2-202ENST00000641679 227 ntBASIC19.52■□□□□ 0.72
ATP6V1AP38606 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V1AP38606 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V1AP38606 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ATP6V1AP38606 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP6V1AP38606 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP6V1AP38606 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP6V1AP38606 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP6V1AP38606 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP6V1AP38606 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP6V1AP38606 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
ATP6V1AP38606 AP003680.1-201ENST00000598970 3660 ntBASIC19.52■□□□□ 0.71
ATP6V1AP38606 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 AC092978.1-202ENST00000637590 1327 ntBASIC19.51■□□□□ 0.71
ATP6V1AP38606 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 MESTP3-201ENST00000503460 968 ntBASIC19.51■□□□□ 0.71
ATP6V1AP38606 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 RN7SL163P-201ENST00000583100 276 ntBASIC19.51■□□□□ 0.71
ATP6V1AP38606 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 MTHFR-217ENST00000641820 1569 ntBASIC19.51■□□□□ 0.71
ATP6V1AP38606 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.51■□□□□ 0.71
ATP6V1AP38606 AD000864.1-201ENST00000624076 2295 ntBASIC19.51■□□□□ 0.71
ATP6V1AP38606 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 AC004899.1-201ENST00000424687 1714 ntBASIC19.51■□□□□ 0.71
ATP6V1AP38606 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V1AP38606 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V1AP38606 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 PCDHA12-202ENST00000613593 2588 ntBASIC19.5■□□□□ 0.71
ATP6V1AP38606 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms