Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.66■□□□□ 0.42
COPB2P35606 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.65■□□□□ 0.42
COPB2P35606 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.65■□□□□ 0.42
COPB2P35606 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
COPB2P35606 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.65■□□□□ 0.42
COPB2P35606 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.65■□□□□ 0.42
COPB2P35606 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.65■□□□□ 0.42
COPB2P35606 AL139094.1-201ENST00000405549 1188 ntBASIC17.65■□□□□ 0.42
COPB2P35606 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COPB2P35606 MIR1202-201ENST00000408529 83 ntBASIC17.65■□□□□ 0.42
COPB2P35606 BCYRN1-201ENST00000418539 200 ntBASIC17.65■□□□□ 0.42
COPB2P35606 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.65■□□□□ 0.42
COPB2P35606 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.65■□□□□ 0.42
COPB2P35606 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.65■□□□□ 0.42
COPB2P35606 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.65■□□□□ 0.42
COPB2P35606 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.65■□□□□ 0.42
COPB2P35606 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.65■□□□□ 0.42
COPB2P35606 AL603764.1-201ENST00000636452 321 ntBASIC17.65■□□□□ 0.42
COPB2P35606 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
COPB2P35606 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.65■□□□□ 0.42
COPB2P35606 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
COPB2P35606 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.65■□□□□ 0.42
COPB2P35606 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
COPB2P35606 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPB2P35606 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
COPB2P35606 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.64■□□□□ 0.42
COPB2P35606 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.42
COPB2P35606 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
COPB2P35606 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.64■□□□□ 0.41
COPB2P35606 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPB2P35606 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPB2P35606 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPB2P35606 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.64■□□□□ 0.41
COPB2P35606 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
COPB2P35606 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPB2P35606 LRRC59-203ENST00000576448 1531 ntBASIC17.64■□□□□ 0.41
COPB2P35606 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.64■□□□□ 0.41
COPB2P35606 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
COPB2P35606 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPB2P35606 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPB2P35606 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.64■□□□□ 0.41
COPB2P35606 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
COPB2P35606 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.64■□□□□ 0.41
COPB2P35606 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.64■□□□□ 0.41
COPB2P35606 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.64■□□□□ 0.41
COPB2P35606 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.64■□□□□ 0.41
COPB2P35606 MIR3615-201ENST00000581999 87 ntBASIC17.64■□□□□ 0.41
COPB2P35606 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.64■□□□□ 0.41
COPB2P35606 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPB2P35606 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.64■□□□□ 0.41
COPB2P35606 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPB2P35606 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.64■□□□□ 0.41
COPB2P35606 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPB2P35606 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
COPB2P35606 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.64■□□□□ 0.41
COPB2P35606 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPB2P35606 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.64■□□□□ 0.41
COPB2P35606 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
COPB2P35606 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COPB2P35606 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.64■□□□□ 0.41
COPB2P35606 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COPB2P35606 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPB2P35606 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.64■□□□□ 0.41
COPB2P35606 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPB2P35606 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.63■□□□□ 0.41
COPB2P35606 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COPB2P35606 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COPB2P35606 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPB2P35606 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.63■□□□□ 0.41
COPB2P35606 AL590640.2-201ENST00000457038 527 ntBASIC17.63■□□□□ 0.41
COPB2P35606 AP001258.2-201ENST00000529891 490 ntBASIC17.63■□□□□ 0.41
COPB2P35606 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.63■□□□□ 0.41
COPB2P35606 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.63■□□□□ 0.41
COPB2P35606 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms