Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC007967.2-201ENST00000432613 625 ntBASIC17.71■□□□□ 0.43
CLCN1P35523 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCN1P35523 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN1P35523 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN1P35523 SLC25A1P1-201ENST00000528351 927 ntBASIC17.71■□□□□ 0.43
CLCN1P35523 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCN1P35523 AC018845.2-201ENST00000568326 409 ntBASIC17.71■□□□□ 0.43
CLCN1P35523 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCN1P35523 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCN1P35523 MIR3909-201ENST00000579518 119 ntBASIC17.71■□□□□ 0.43
CLCN1P35523 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN1P35523 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCN1P35523 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN1P35523 BX640515.1-201ENST00000617215 977 ntBASIC17.71■□□□□ 0.43
CLCN1P35523 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CLCN1P35523 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCN1P35523 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN1P35523 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 AL365209.1-201ENST00000624418 6473 ntBASIC17.71■□□□□ 0.43
CLCN1P35523 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLCN1P35523 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN1P35523 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLCN1P35523 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
CLCN1P35523 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLCN1P35523 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CLCN1P35523 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLCN1P35523 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CLCN1P35523 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.7■□□□□ 0.42
CLCN1P35523 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 PMS2P4-201ENST00000412466 1052 ntBASIC17.7■□□□□ 0.42
CLCN1P35523 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.7■□□□□ 0.42
CLCN1P35523 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCN1P35523 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.7■□□□□ 0.42
CLCN1P35523 AC023141.13-201ENST00000604991 943 ntBASIC17.7■□□□□ 0.42
CLCN1P35523 AC020765.3-201ENST00000613051 740 ntBASIC17.7■□□□□ 0.42
CLCN1P35523 AC004877.2-201ENST00000623941 599 ntBASIC17.7■□□□□ 0.42
CLCN1P35523 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CLCN1P35523 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCN1P35523 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 AC019294.4-201ENST00000561777 2905 ntBASIC17.7■□□□□ 0.42
CLCN1P35523 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLCN1P35523 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLCN1P35523 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN1P35523 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN1P35523 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN1P35523 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCN1P35523 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCN1P35523 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCN1P35523 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 AC113367.3-201ENST00000508316 1912 ntBASIC17.69■□□□□ 0.42
CLCN1P35523 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN1P35523 AP001267.2-201ENST00000532619 2086 ntBASIC17.69■□□□□ 0.42
CLCN1P35523 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLCN1P35523 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms