Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNGA1P29973 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.63■□□□□ 0.41
CNGA1P29973 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNGA1P29973 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.63■□□□□ 0.41
CNGA1P29973 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.63■□□□□ 0.41
CNGA1P29973 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CNGA1P29973 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.63■□□□□ 0.41
CNGA1P29973 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNGA1P29973 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.63■□□□□ 0.41
CNGA1P29973 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNGA1P29973 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.63■□□□□ 0.41
CNGA1P29973 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CNGA1P29973 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.63■□□□□ 0.41
CNGA1P29973 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CNGA1P29973 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.63■□□□□ 0.41
CNGA1P29973 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNGA1P29973 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNGA1P29973 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.63■□□□□ 0.41
CNGA1P29973 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.63■□□□□ 0.41
CNGA1P29973 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNGA1P29973 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CNGA1P29973 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CNGA1P29973 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CNGA1P29973 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNGA1P29973 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNGA1P29973 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CNGA1P29973 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNGA1P29973 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CNGA1P29973 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CNGA1P29973 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CNGA1P29973 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CNGA1P29973 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CNGA1P29973 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.62■□□□□ 0.41
CNGA1P29973 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CNGA1P29973 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.62■□□□□ 0.41
CNGA1P29973 AC069224.1-201ENST00000566372 1715 ntBASIC17.62■□□□□ 0.41
CNGA1P29973 AC010491.1-201ENST00000563101 2797 ntBASIC17.62■□□□□ 0.41
CNGA1P29973 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.62■□□□□ 0.41
CNGA1P29973 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CNGA1P29973 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.62■□□□□ 0.41
CNGA1P29973 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.62■□□□□ 0.41
CNGA1P29973 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CNGA1P29973 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.62■□□□□ 0.41
CNGA1P29973 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.62■□□□□ 0.41
CNGA1P29973 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.62■□□□□ 0.41
CNGA1P29973 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.62■□□□□ 0.41
CNGA1P29973 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
CNGA1P29973 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.62■□□□□ 0.41
CNGA1P29973 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.62■□□□□ 0.41
CNGA1P29973 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.62■□□□□ 0.41
CNGA1P29973 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.62■□□□□ 0.41
CNGA1P29973 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CNGA1P29973 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.62■□□□□ 0.41
CNGA1P29973 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.62■□□□□ 0.41
CNGA1P29973 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.62■□□□□ 0.41
CNGA1P29973 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.62■□□□□ 0.41
CNGA1P29973 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.62■□□□□ 0.41
CNGA1P29973 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.62■□□□□ 0.41
CNGA1P29973 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CNGA1P29973 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
CNGA1P29973 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.62■□□□□ 0.41
CNGA1P29973 LINC02447-202ENST00000501888 2146 ntBASIC17.62■□□□□ 0.41
CNGA1P29973 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNGA1P29973 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNGA1P29973 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNGA1P29973 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNGA1P29973 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNGA1P29973 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.61■□□□□ 0.41
CNGA1P29973 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CNGA1P29973 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNGA1P29973 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNGA1P29973 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNGA1P29973 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.61■□□□□ 0.41
CNGA1P29973 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNGA1P29973 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNGA1P29973 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.61■□□□□ 0.41
CNGA1P29973 HOMER2P2-201ENST00000451621 847 ntBASIC17.61■□□□□ 0.41
CNGA1P29973 AL591846.1-201ENST00000451736 433 ntBASIC17.61■□□□□ 0.41
CNGA1P29973 AKR7A2P1-201ENST00000460134 915 ntBASIC17.61■□□□□ 0.41
CNGA1P29973 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.61■□□□□ 0.41
CNGA1P29973 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.61■□□□□ 0.41
CNGA1P29973 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.61■□□□□ 0.41
CNGA1P29973 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.61■□□□□ 0.41
CNGA1P29973 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.61■□□□□ 0.41
CNGA1P29973 AC104982.3-201ENST00000581995 514 ntBASIC17.61■□□□□ 0.41
CNGA1P29973 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms