Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
CTGFP29279 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CTGFP29279 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CTGFP29279 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.1■□□□□ 0.33
CTGFP29279 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CTGFP29279 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.1■□□□□ 0.33
CTGFP29279 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CTGFP29279 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.09■□□□□ 0.33
CTGFP29279 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CTGFP29279 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CTGFP29279 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.09■□□□□ 0.33
CTGFP29279 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.09■□□□□ 0.33
CTGFP29279 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.09■□□□□ 0.33
CTGFP29279 FAM58BP-201ENST00000439056 645 ntBASIC17.09■□□□□ 0.33
CTGFP29279 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.09■□□□□ 0.33
CTGFP29279 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.09■□□□□ 0.33
CTGFP29279 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.09■□□□□ 0.33
CTGFP29279 AC005357.2-202ENST00000590507 1060 ntBASIC17.09■□□□□ 0.33
CTGFP29279 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CTGFP29279 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.09■□□□□ 0.33
CTGFP29279 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.09■□□□□ 0.33
CTGFP29279 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 AL360270.3-201ENST00000609118 1348 ntBASIC17.09■□□□□ 0.33
CTGFP29279 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CTGFP29279 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.09■□□□□ 0.33
CTGFP29279 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.09■□□□□ 0.33
CTGFP29279 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CTGFP29279 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.09■□□□□ 0.33
CTGFP29279 LINC02447-202ENST00000501888 2146 ntBASIC17.09■□□□□ 0.33
CTGFP29279 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CTGFP29279 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CTGFP29279 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CTGFP29279 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTGFP29279 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CTGFP29279 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTGFP29279 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CTGFP29279 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.08■□□□□ 0.33
CTGFP29279 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CTGFP29279 AC009090.5-201ENST00000624886 2285 ntBASIC17.08■□□□□ 0.33
CTGFP29279 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.08■□□□□ 0.33
CTGFP29279 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTGFP29279 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTGFP29279 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CTGFP29279 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTGFP29279 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.08■□□□□ 0.32
CTGFP29279 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTGFP29279 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTGFP29279 FAM90A2P-201ENST00000511144 1395 ntBASIC17.08■□□□□ 0.32
CTGFP29279 FAM90A25P-201ENST00000528404 1395 ntBASIC17.08■□□□□ 0.32
CTGFP29279 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTGFP29279 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTGFP29279 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTGFP29279 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.08■□□□□ 0.32
CTGFP29279 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTGFP29279 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.08■□□□□ 0.32
CTGFP29279 AC012362.1-201ENST00000434906 739 ntBASIC17.08■□□□□ 0.32
CTGFP29279 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.08■□□□□ 0.32
CTGFP29279 NDUFS6P1-201ENST00000485187 316 ntBASIC17.08■□□□□ 0.32
CTGFP29279 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.08■□□□□ 0.32
CTGFP29279 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.08■□□□□ 0.32
CTGFP29279 AL157813.1-201ENST00000612996 587 ntBASIC17.08■□□□□ 0.32
CTGFP29279 AL161773.1-201ENST00000624845 863 ntBASIC17.08■□□□□ 0.32
CTGFP29279 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.08■□□□□ 0.32
CTGFP29279 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTGFP29279 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTGFP29279 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CTGFP29279 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.08■□□□□ 0.32
CTGFP29279 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTGFP29279 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.08■□□□□ 0.32
CTGFP29279 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CTGFP29279 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTGFP29279 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CTGFP29279 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CTGFP29279 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTGFP29279 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms