Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.84□□□□□ -0.03
LAMA1P25391 AC005740.2-201ENST00000511085 419 ntBASIC14.84□□□□□ -0.03
LAMA1P25391 TMCO5B-205ENST00000530020 894 ntBASIC14.84□□□□□ -0.03
LAMA1P25391 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LAMA1P25391 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.84□□□□□ -0.03
LAMA1P25391 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.84□□□□□ -0.03
LAMA1P25391 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LAMA1P25391 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LAMA1P25391 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LAMA1P25391 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LAMA1P25391 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LAMA1P25391 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.84□□□□□ -0.03
LAMA1P25391 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LAMA1P25391 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LAMA1P25391 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LAMA1P25391 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LAMA1P25391 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LAMA1P25391 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LAMA1P25391 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.84□□□□□ -0.03
LAMA1P25391 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LAMA1P25391 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LAMA1P25391 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.84□□□□□ -0.03
LAMA1P25391 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.84□□□□□ -0.03
LAMA1P25391 AC011742.3-201ENST00000439053 820 ntBASIC14.84□□□□□ -0.03
LAMA1P25391 AC073150.1-201ENST00000450406 1084 ntBASIC14.84□□□□□ -0.03
LAMA1P25391 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.84□□□□□ -0.03
LAMA1P25391 Z98259.2-201ENST00000641583 609 ntBASIC14.84□□□□□ -0.03
LAMA1P25391 AC090616.6-203ENST00000579186 1945 ntBASIC14.84□□□□□ -0.03
LAMA1P25391 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.83□□□□□ -0.03
LAMA1P25391 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.83□□□□□ -0.03
LAMA1P25391 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
LAMA1P25391 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.83□□□□□ -0.03
LAMA1P25391 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.83□□□□□ -0.03
LAMA1P25391 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LAMA1P25391 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
LAMA1P25391 AL391005.1-201ENST00000623953 2435 ntBASIC14.83□□□□□ -0.03
LAMA1P25391 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LAMA1P25391 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.83□□□□□ -0.04
LAMA1P25391 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.83□□□□□ -0.04
LAMA1P25391 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
LAMA1P25391 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LAMA1P25391 RTN3P1-201ENST00000536295 711 ntBASIC14.83□□□□□ -0.04
LAMA1P25391 AC004466.1-201ENST00000599515 1080 ntBASIC14.83□□□□□ -0.04
LAMA1P25391 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.83□□□□□ -0.04
LAMA1P25391 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LAMA1P25391 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.83□□□□□ -0.04
LAMA1P25391 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.83□□□□□ -0.04
LAMA1P25391 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LAMA1P25391 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.83□□□□□ -0.04
LAMA1P25391 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.83□□□□□ -0.04
LAMA1P25391 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 AC105250.1-201ENST00000509378 2057 ntBASIC14.83□□□□□ -0.04
LAMA1P25391 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 MIR4754-201ENST00000582477 89 ntBASIC14.83□□□□□ -0.04
LAMA1P25391 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.83□□□□□ -0.04
LAMA1P25391 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LAMA1P25391 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.83□□□□□ -0.04
LAMA1P25391 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LAMA1P25391 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LAMA1P25391 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LAMA1P25391 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.82□□□□□ -0.04
LAMA1P25391 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LAMA1P25391 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.82□□□□□ -0.04
LAMA1P25391 IGHV3-37-201ENST00000518544 340 ntBASIC14.82□□□□□ -0.04
LAMA1P25391 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.82□□□□□ -0.04
LAMA1P25391 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.82□□□□□ -0.04
LAMA1P25391 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LAMA1P25391 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.82□□□□□ -0.04
LAMA1P25391 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LAMA1P25391 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LAMA1P25391 AL137783.1-201ENST00000623494 1896 ntBASIC14.82□□□□□ -0.04
LAMA1P25391 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LAMA1P25391 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.82□□□□□ -0.04
LAMA1P25391 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
LAMA1P25391 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LAMA1P25391 AP000593.2-201ENST00000542775 1433 ntBASIC14.82□□□□□ -0.04
LAMA1P25391 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LAMA1P25391 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LAMA1P25391 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LAMA1P25391 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LAMA1P25391 AC098935.1-201ENST00000446057 611 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms