Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AL031133.1-201ENST00000406807 723 ntBASIC13.19□□□□□ -0.3
VAMP1P23763 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.19□□□□□ -0.3
VAMP1P23763 SART3-203ENST00000546611 1184 ntBASIC13.19□□□□□ -0.3
VAMP1P23763 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
VAMP1P23763 MIR3909-201ENST00000579518 119 ntBASIC13.19□□□□□ -0.3
VAMP1P23763 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.19□□□□□ -0.3
VAMP1P23763 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
VAMP1P23763 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
VAMP1P23763 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.19□□□□□ -0.3
VAMP1P23763 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP1P23763 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
VAMP1P23763 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
VAMP1P23763 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
VAMP1P23763 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 AC107918.4-201ENST00000641966 3141 ntBASIC13.18□□□□□ -0.3
VAMP1P23763 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 SNTG1-202ENST00000518864 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.18□□□□□ -0.3
VAMP1P23763 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.18□□□□□ -0.3
VAMP1P23763 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.18□□□□□ -0.3
VAMP1P23763 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.18□□□□□ -0.3
VAMP1P23763 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.18□□□□□ -0.3
VAMP1P23763 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.18□□□□□ -0.3
VAMP1P23763 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.18□□□□□ -0.3
VAMP1P23763 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.18□□□□□ -0.3
VAMP1P23763 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
VAMP1P23763 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.18□□□□□ -0.3
VAMP1P23763 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.18□□□□□ -0.3
VAMP1P23763 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VAMP1P23763 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.18□□□□□ -0.3
VAMP1P23763 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.18□□□□□ -0.3
VAMP1P23763 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.18□□□□□ -0.3
VAMP1P23763 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VAMP1P23763 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.17□□□□□ -0.3
VAMP1P23763 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.17□□□□□ -0.3
VAMP1P23763 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 BX640514.1-201ENST00000583223 1918 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
VAMP1P23763 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.17□□□□□ -0.3
VAMP1P23763 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.17□□□□□ -0.3
VAMP1P23763 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms