Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.98■□□□□ 0.47
ERCC3P19447 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.98■□□□□ 0.47
ERCC3P19447 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC3P19447 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC3P19447 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC3P19447 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC3P19447 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ERCC3P19447 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ERCC3P19447 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.98■□□□□ 0.47
ERCC3P19447 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC3P19447 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC3P19447 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC3P19447 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC3P19447 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC3P19447 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC3P19447 AL603832.2-201ENST00000566195 2125 ntBASIC17.98■□□□□ 0.47
ERCC3P19447 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
ERCC3P19447 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC3P19447 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ERCC3P19447 DRD5P1-201ENST00000456605 1438 ntBASIC17.98■□□□□ 0.47
ERCC3P19447 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC3P19447 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC3P19447 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
ERCC3P19447 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC3P19447 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.97■□□□□ 0.47
ERCC3P19447 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
ERCC3P19447 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ERCC3P19447 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
ERCC3P19447 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.97■□□□□ 0.47
ERCC3P19447 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.97■□□□□ 0.47
ERCC3P19447 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC3P19447 AC026954.1-201ENST00000429771 1293 ntBASIC17.97■□□□□ 0.47
ERCC3P19447 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ERCC3P19447 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
ERCC3P19447 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.97■□□□□ 0.47
ERCC3P19447 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.97■□□□□ 0.47
ERCC3P19447 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.97■□□□□ 0.47
ERCC3P19447 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.97■□□□□ 0.47
ERCC3P19447 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.97■□□□□ 0.47
ERCC3P19447 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.97■□□□□ 0.47
ERCC3P19447 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ERCC3P19447 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 AL133338.1-201ENST00000565695 1517 ntBASIC17.97■□□□□ 0.47
ERCC3P19447 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 AL365203.3-201ENST00000609742 2057 ntBASIC17.97■□□□□ 0.47
ERCC3P19447 AL136379.1-201ENST00000623471 2642 ntBASIC17.97■□□□□ 0.47
ERCC3P19447 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC3P19447 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ERCC3P19447 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC3P19447 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.96■□□□□ 0.47
ERCC3P19447 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC3P19447 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC3P19447 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC3P19447 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC3P19447 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC3P19447 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC3P19447 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.96■□□□□ 0.47
ERCC3P19447 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ERCC3P19447 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.96■□□□□ 0.47
ERCC3P19447 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC3P19447 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.96■□□□□ 0.47
ERCC3P19447 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC3P19447 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.96■□□□□ 0.47
ERCC3P19447 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.96■□□□□ 0.47
ERCC3P19447 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC3P19447 AC108725.1-201ENST00000495472 409 ntBASIC17.96■□□□□ 0.47
ERCC3P19447 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC3P19447 KRT90P-201ENST00000549264 1064 ntBASIC17.96■□□□□ 0.47
ERCC3P19447 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.96■□□□□ 0.47
ERCC3P19447 GNRHR2-203ENST00000581100 1187 ntBASIC17.96■□□□□ 0.47
ERCC3P19447 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.96■□□□□ 0.47
ERCC3P19447 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.96■□□□□ 0.47
ERCC3P19447 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC3P19447 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC3P19447 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC3P19447 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC3P19447 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC3P19447 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC3P19447 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC3P19447 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ERCC3P19447 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
ERCC3P19447 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC3P19447 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC3P19447 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms