Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VCLP18206 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.67■□□□□ 0.1
VCLP18206 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VCLP18206 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCLP18206 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.67■□□□□ 0.1
VCLP18206 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCLP18206 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCLP18206 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCLP18206 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VCLP18206 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCLP18206 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.66■□□□□ 0.1
VCLP18206 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VCLP18206 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VCLP18206 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.66■□□□□ 0.1
VCLP18206 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VCLP18206 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VCLP18206 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.66■□□□□ 0.1
VCLP18206 TERF1P3-201ENST00000505638 1227 ntBASIC15.66■□□□□ 0.1
VCLP18206 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.66■□□□□ 0.1
VCLP18206 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.66■□□□□ 0.1
VCLP18206 AL450472.2-201ENST00000603663 1156 ntBASIC15.66■□□□□ 0.1
VCLP18206 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.66■□□□□ 0.1
VCLP18206 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.66■□□□□ 0.1
VCLP18206 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
VCLP18206 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.66■□□□□ 0.1
VCLP18206 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.66■□□□□ 0.1
VCLP18206 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.66■□□□□ 0.1
VCLP18206 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.66■□□□□ 0.1
VCLP18206 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCLP18206 REXO1L1P-202ENST00000608646 1974 ntBASIC15.66■□□□□ 0.1
VCLP18206 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.65■□□□□ 0.1
VCLP18206 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VCLP18206 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.65■□□□□ 0.1
VCLP18206 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.65■□□□□ 0.1
VCLP18206 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VCLP18206 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
VCLP18206 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VCLP18206 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.65■□□□□ 0.1
VCLP18206 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
VCLP18206 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.65■□□□□ 0.1
VCLP18206 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.65■□□□□ 0.1
VCLP18206 PHKG1P2-201ENST00000457537 863 ntBASIC15.65■□□□□ 0.1
VCLP18206 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.65■□□□□ 0.1
VCLP18206 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VCLP18206 AC135586.1-201ENST00000539323 574 ntBASIC15.65■□□□□ 0.1
VCLP18206 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.65■□□□□ 0.1
VCLP18206 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VCLP18206 AC074044.1-201ENST00000609673 707 ntBASIC15.65■□□□□ 0.1
VCLP18206 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.65■□□□□ 0.1
VCLP18206 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.65■□□□□ 0.1
VCLP18206 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.65■□□□□ 0.1
VCLP18206 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
VCLP18206 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.65■□□□□ 0.1
VCLP18206 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.65■□□□□ 0.1
VCLP18206 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCLP18206 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms