Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PDGFRAP16234 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFRAP16234 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 AC007541.1-201ENST00000570282 1469 ntBASIC16.29■□□□□ 0.2
PDGFRAP16234 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PDGFRAP16234 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFRAP16234 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PDGFRAP16234 MST1L-201ENST00000442552 2185 ntBASIC16.28■□□□□ 0.2
PDGFRAP16234 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
PDGFRAP16234 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.28■□□□□ 0.2
PDGFRAP16234 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFRAP16234 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.28■□□□□ 0.2
PDGFRAP16234 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFRAP16234 AC025181.2-201ENST00000606994 802 ntBASIC16.28■□□□□ 0.2
PDGFRAP16234 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.28■□□□□ 0.2
PDGFRAP16234 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PDGFRAP16234 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFRAP16234 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.28■□□□□ 0.2
PDGFRAP16234 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
PDGFRAP16234 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFRAP16234 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFRAP16234 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
PDGFRAP16234 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.27■□□□□ 0.2
PDGFRAP16234 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFRAP16234 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFRAP16234 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFRAP16234 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFRAP16234 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.27■□□□□ 0.2
PDGFRAP16234 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.27■□□□□ 0.2
PDGFRAP16234 CRB3P1-201ENST00000449338 276 ntBASIC16.27■□□□□ 0.2
PDGFRAP16234 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFRAP16234 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.27■□□□□ 0.2
PDGFRAP16234 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 TPRX2P-201ENST00000535362 881 ntBASIC16.27■□□□□ 0.2
PDGFRAP16234 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.27■□□□□ 0.2
PDGFRAP16234 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFRAP16234 AC000095.1-201ENST00000603208 874 ntBASIC16.27■□□□□ 0.2
PDGFRAP16234 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.27■□□□□ 0.2
PDGFRAP16234 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFRAP16234 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFRAP16234 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PDGFRAP16234 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFRAP16234 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFRAP16234 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFRAP16234 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFRAP16234 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFRAP16234 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFRAP16234 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFRAP16234 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PDGFRAP16234 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.27■□□□□ 0.19
PDGFRAP16234 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.27■□□□□ 0.19
PDGFRAP16234 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.27■□□□□ 0.19
PDGFRAP16234 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFRAP16234 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFRAP16234 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.27■□□□□ 0.19
PDGFRAP16234 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFRAP16234 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFRAP16234 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PDGFRAP16234 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.26■□□□□ 0.19
PDGFRAP16234 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PDGFRAP16234 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.26■□□□□ 0.19
PDGFRAP16234 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFRAP16234 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms