Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGB4P16144 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGB4P16144 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.32■□□□□ 0.68
ITGB4P16144 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ITGB4P16144 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.32■□□□□ 0.68
ITGB4P16144 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGB4P16144 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ITGB4P16144 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ITGB4P16144 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC19.32■□□□□ 0.68
ITGB4P16144 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC19.32■□□□□ 0.68
ITGB4P16144 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.32■□□□□ 0.68
ITGB4P16144 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC19.32■□□□□ 0.68
ITGB4P16144 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.32■□□□□ 0.68
ITGB4P16144 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC19.32■□□□□ 0.68
ITGB4P16144 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC19.32■□□□□ 0.68
ITGB4P16144 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.32■□□□□ 0.68
ITGB4P16144 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC19.32■□□□□ 0.68
ITGB4P16144 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.32■□□□□ 0.68
ITGB4P16144 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ITGB4P16144 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGB4P16144 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGB4P16144 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.32■□□□□ 0.68
ITGB4P16144 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGB4P16144 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGB4P16144 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGB4P16144 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ITGB4P16144 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGB4P16144 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ITGB4P16144 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.31■□□□□ 0.68
ITGB4P16144 TMCO5B-205ENST00000530020 894 ntBASIC19.31■□□□□ 0.68
ITGB4P16144 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGB4P16144 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGB4P16144 AL805961.1-201ENST00000642026 753 ntBASIC19.31■□□□□ 0.68
ITGB4P16144 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 AC136759.1-202ENST00000530858 2194 ntBASIC19.31■□□□□ 0.68
ITGB4P16144 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.31■□□□□ 0.68
ITGB4P16144 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGB4P16144 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGB4P16144 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC19.31■□□□□ 0.68
ITGB4P16144 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.31■□□□□ 0.68
ITGB4P16144 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.31■□□□□ 0.68
ITGB4P16144 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGB4P16144 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
ITGB4P16144 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ITGB4P16144 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ITGB4P16144 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGB4P16144 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC19.3■□□□□ 0.68
ITGB4P16144 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.3■□□□□ 0.68
ITGB4P16144 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ITGB4P16144 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.3■□□□□ 0.68
ITGB4P16144 IGHV3-37-201ENST00000518544 340 ntBASIC19.3■□□□□ 0.68
ITGB4P16144 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.3■□□□□ 0.68
ITGB4P16144 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.3■□□□□ 0.68
ITGB4P16144 AL109837.1-201ENST00000603272 613 ntBASIC19.3■□□□□ 0.68
ITGB4P16144 AC242376.2-201ENST00000619355 883 ntBASIC19.3■□□□□ 0.68
ITGB4P16144 AC023090.2-201ENST00000625182 2110 ntBASIC19.3■□□□□ 0.68
ITGB4P16144 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.3■□□□□ 0.68
ITGB4P16144 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19.3■□□□□ 0.68
ITGB4P16144 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.3■□□□□ 0.68
ITGB4P16144 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC19.3■□□□□ 0.68
ITGB4P16144 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.3■□□□□ 0.68
ITGB4P16144 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ITGB4P16144 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 NAGK-204ENST00000443872 878 ntTSL 3 BASIC19.3■□□□□ 0.68
ITGB4P16144 AC006122.1-201ENST00000493323 440 ntBASIC19.3■□□□□ 0.68
ITGB4P16144 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC19.3■□□□□ 0.68
ITGB4P16144 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC19.3■□□□□ 0.68
ITGB4P16144 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.3■□□□□ 0.68
ITGB4P16144 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITGB4P16144 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGB4P16144 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ITGB4P16144 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ITGB4P16144 AL139384.1-201ENST00000612143 3047 ntBASIC19.29■□□□□ 0.68
ITGB4P16144 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ITGB4P16144 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms