Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.43□□□□□ -0.1
UBL4AP11441 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.43□□□□□ -0.1
UBL4AP11441 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.43□□□□□ -0.1
UBL4AP11441 AC092580.3-201ENST00000430932 139 ntBASIC14.43□□□□□ -0.1
UBL4AP11441 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.43□□□□□ -0.1
UBL4AP11441 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.43□□□□□ -0.1
UBL4AP11441 AC097493.3-201ENST00000509725 367 ntBASIC14.43□□□□□ -0.1
UBL4AP11441 SLED1-202ENST00000512051 380 ntBASIC14.43□□□□□ -0.1
UBL4AP11441 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.43□□□□□ -0.1
UBL4AP11441 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.43□□□□□ -0.1
UBL4AP11441 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
UBL4AP11441 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.43□□□□□ -0.1
UBL4AP11441 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.43□□□□□ -0.1
UBL4AP11441 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
UBL4AP11441 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
UBL4AP11441 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.43□□□□□ -0.1
UBL4AP11441 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 Z97205.2-201ENST00000564697 1639 ntBASIC14.43□□□□□ -0.1
UBL4AP11441 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.43□□□□□ -0.1
UBL4AP11441 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
UBL4AP11441 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
UBL4AP11441 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.43□□□□□ -0.1
UBL4AP11441 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.43□□□□□ -0.1
UBL4AP11441 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
UBL4AP11441 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
UBL4AP11441 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.43□□□□□ -0.1
UBL4AP11441 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UBL4AP11441 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBL4AP11441 AC009090.5-201ENST00000624886 2285 ntBASIC14.43□□□□□ -0.1
UBL4AP11441 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.42□□□□□ -0.1
UBL4AP11441 PPT1-215ENST00000641471 2368 ntBASIC14.42□□□□□ -0.1
UBL4AP11441 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.42□□□□□ -0.1
UBL4AP11441 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 AC087499.5-201ENST00000452760 1342 ntBASIC14.42□□□□□ -0.1
UBL4AP11441 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.42□□□□□ -0.1
UBL4AP11441 AC100757.3-201ENST00000622361 1406 ntBASIC14.42□□□□□ -0.1
UBL4AP11441 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.42□□□□□ -0.1
UBL4AP11441 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.42□□□□□ -0.1
UBL4AP11441 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.42□□□□□ -0.1
UBL4AP11441 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UBL4AP11441 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.42□□□□□ -0.1
UBL4AP11441 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.42□□□□□ -0.1
UBL4AP11441 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.42□□□□□ -0.1
UBL4AP11441 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UBL4AP11441 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.42□□□□□ -0.1
UBL4AP11441 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.42□□□□□ -0.1
UBL4AP11441 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.42□□□□□ -0.1
UBL4AP11441 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.42□□□□□ -0.1
UBL4AP11441 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.42□□□□□ -0.1
UBL4AP11441 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 DUX4L27-201ENST00000554796 1261 ntBASIC14.42□□□□□ -0.1
UBL4AP11441 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.42□□□□□ -0.1
UBL4AP11441 AC074044.1-201ENST00000609673 707 ntBASIC14.42□□□□□ -0.1
UBL4AP11441 AC106028.4-201ENST00000614509 607 ntBASIC14.42□□□□□ -0.1
UBL4AP11441 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.42□□□□□ -0.1
UBL4AP11441 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.42□□□□□ -0.1
UBL4AP11441 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
UBL4AP11441 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
UBL4AP11441 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
UBL4AP11441 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UBL4AP11441 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.42□□□□□ -0.1
UBL4AP11441 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.42□□□□□ -0.1
UBL4AP11441 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms