Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.31■□□□□ 0.2
RARAP10276 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RARAP10276 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RARAP10276 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RARAP10276 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 MROH4P-201ENST00000431302 1578 ntBASIC16.3■□□□□ 0.2
RARAP10276 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RARAP10276 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RARAP10276 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.3■□□□□ 0.2
RARAP10276 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RARAP10276 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RARAP10276 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 RPL13P2-201ENST00000440687 659 ntBASIC16.3■□□□□ 0.2
RARAP10276 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.3■□□□□ 0.2
RARAP10276 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.3■□□□□ 0.2
RARAP10276 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.3■□□□□ 0.2
RARAP10276 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.3■□□□□ 0.2
RARAP10276 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RARAP10276 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.3■□□□□ 0.2
RARAP10276 LINC01115-203ENST00000606068 577 ntBASIC16.3■□□□□ 0.2
RARAP10276 AL158211.3-201ENST00000607385 239 ntBASIC16.3■□□□□ 0.2
RARAP10276 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.3■□□□□ 0.2
RARAP10276 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 AC084364.1-201ENST00000551967 1556 ntBASIC16.3■□□□□ 0.2
RARAP10276 AC232323.1-201ENST00000540724 2099 ntBASIC16.3■□□□□ 0.2
RARAP10276 REXO1L5P-201ENST00000622260 2098 ntBASIC16.3■□□□□ 0.2
RARAP10276 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RARAP10276 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.29■□□□□ 0.2
RARAP10276 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RARAP10276 AC007191.1-201ENST00000623179 2995 ntBASIC16.29■□□□□ 0.2
RARAP10276 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.29■□□□□ 0.2
RARAP10276 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RARAP10276 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.29■□□□□ 0.2
RARAP10276 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 AC087499.5-201ENST00000452760 1342 ntBASIC16.29■□□□□ 0.2
RARAP10276 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 GRK6P1-201ENST00000400595 1711 ntBASIC16.29■□□□□ 0.2
RARAP10276 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RARAP10276 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.29■□□□□ 0.2
RARAP10276 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.29■□□□□ 0.2
RARAP10276 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.29■□□□□ 0.2
RARAP10276 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.29■□□□□ 0.2
RARAP10276 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 DUX4L27-201ENST00000554796 1261 ntBASIC16.29■□□□□ 0.2
RARAP10276 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.29■□□□□ 0.2
RARAP10276 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 AL844908.2-201ENST00000609461 460 ntBASIC16.29■□□□□ 0.2
RARAP10276 AL109936.8-201ENST00000641772 604 ntBASIC16.29■□□□□ 0.2
RARAP10276 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RARAP10276 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.29■□□□□ 0.2
RARAP10276 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RARAP10276 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.29■□□□□ 0.2
RARAP10276 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RARAP10276 CICP11-201ENST00000434745 2827 ntBASIC16.29■□□□□ 0.2
RARAP10276 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RARAP10276 AC139749.1-202ENST00000617529 3139 ntBASIC16.29■□□□□ 0.2
RARAP10276 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RARAP10276 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.29■□□□□ 0.2
RARAP10276 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms