Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 GAPDHP40-201ENST00000505218 1006 ntBASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 MIR4313-201ENST00000580760 101 ntBASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 AC107373.2-201ENST00000607735 490 ntBASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB40ALP0C0E4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 CSF2RBP1-201ENST00000447905 391 ntBASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 FTH1P14-201ENST00000482930 551 ntBASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB40ALP0C0E4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 NORAD-201ENST00000565493 5339 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms