Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 ANKRD19P-201ENST00000338192 862 ntBASIC17.3■□□□□ 0.36
CYP3A4P08684 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.3■□□□□ 0.36
CYP3A4P08684 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.3■□□□□ 0.36
CYP3A4P08684 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.3■□□□□ 0.36
CYP3A4P08684 CNN2P8-201ENST00000421872 913 ntBASIC17.3■□□□□ 0.36
CYP3A4P08684 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CYP3A4P08684 AC119751.2-201ENST00000504529 210 ntBASIC17.3■□□□□ 0.36
CYP3A4P08684 SNX29P1-201ENST00000548357 1007 ntBASIC17.3■□□□□ 0.36
CYP3A4P08684 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.3■□□□□ 0.36
CYP3A4P08684 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CYP3A4P08684 AC244669.2-201ENST00000612320 853 ntBASIC17.3■□□□□ 0.36
CYP3A4P08684 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.3■□□□□ 0.36
CYP3A4P08684 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.3■□□□□ 0.36
CYP3A4P08684 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CYP3A4P08684 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 AL162727.3-201ENST00000635661 2787 ntBASIC17.3■□□□□ 0.36
CYP3A4P08684 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CYP3A4P08684 AP000845.1-201ENST00000581677 2131 ntBASIC17.3■□□□□ 0.36
CYP3A4P08684 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.29■□□□□ 0.36
CYP3A4P08684 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CYP3A4P08684 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.29■□□□□ 0.36
CYP3A4P08684 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.29■□□□□ 0.36
CYP3A4P08684 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.29■□□□□ 0.36
CYP3A4P08684 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CYP3A4P08684 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.29■□□□□ 0.36
CYP3A4P08684 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CYP3A4P08684 RPL7P3-201ENST00000441388 714 ntBASIC17.29■□□□□ 0.36
CYP3A4P08684 ATP5G2P4-201ENST00000442175 420 ntBASIC17.29■□□□□ 0.36
CYP3A4P08684 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.29■□□□□ 0.36
CYP3A4P08684 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.29■□□□□ 0.36
CYP3A4P08684 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.29■□□□□ 0.36
CYP3A4P08684 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.29■□□□□ 0.36
CYP3A4P08684 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.29■□□□□ 0.36
CYP3A4P08684 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.29■□□□□ 0.36
CYP3A4P08684 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.29■□□□□ 0.36
CYP3A4P08684 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.29■□□□□ 0.36
CYP3A4P08684 AC017083.2-201ENST00000608069 979 ntBASIC17.29■□□□□ 0.36
CYP3A4P08684 MIR6775-201ENST00000617557 69 ntBASIC17.29■□□□□ 0.36
CYP3A4P08684 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.29■□□□□ 0.36
CYP3A4P08684 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.29■□□□□ 0.36
CYP3A4P08684 AC138035.3-201ENST00000622706 2791 ntBASIC17.29■□□□□ 0.36
CYP3A4P08684 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.29■□□□□ 0.36
CYP3A4P08684 AC013268.4-201ENST00000637413 2228 ntBASIC17.29■□□□□ 0.36
CYP3A4P08684 AL157414.3-201ENST00000624276 1954 ntBASIC17.29■□□□□ 0.36
CYP3A4P08684 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CYP3A4P08684 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.29■□□□□ 0.36
CYP3A4P08684 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CYP3A4P08684 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CYP3A4P08684 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CYP3A4P08684 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CYP3A4P08684 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CYP3A4P08684 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.28■□□□□ 0.36
CYP3A4P08684 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.28■□□□□ 0.36
CYP3A4P08684 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.28■□□□□ 0.36
CYP3A4P08684 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.28■□□□□ 0.36
CYP3A4P08684 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CYP3A4P08684 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 LRRC59-203ENST00000576448 1531 ntBASIC17.28■□□□□ 0.36
CYP3A4P08684 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CYP3A4P08684 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CYP3A4P08684 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.28■□□□□ 0.36
CYP3A4P08684 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CYP3A4P08684 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.28■□□□□ 0.36
CYP3A4P08684 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.28■□□□□ 0.36
CYP3A4P08684 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.28■□□□□ 0.36
CYP3A4P08684 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CYP3A4P08684 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.28■□□□□ 0.36
CYP3A4P08684 KRT90P-201ENST00000549264 1064 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms